| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0629 |
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| Symbol | |
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| ID | 6282591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 683843 |
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| End bp | 684535 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642620194 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_001894278 |
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| Protein GI | 187922636 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.452847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.285643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCAGTC ACTCCTACAA CAAACGAGAG AAAATCCTGG TGAGTATTCG AATTATCCTA
GCGGACGATC ATCCATTCGT AATCCTTGGC GTCCGCGCCG CGCTGGAAAT GCAGGCCGGC
ATCACCGTCG TCGATCAGGC GACGGATCCC GTTTCGCTGA TCGAATGCTT GCGGAGCACG
CCCTGCGATG TTCTCGTTAC CGATCTCTCG ATGCCGGATC ATTCATTCGC CGTCGACGAC
GGTCTCAATC TCGTGCGACG CATCCGCAGT TGCTGGCCGC AATTGCGCAT CGTGGTAATG
ACAACTCTGA CAAACCCCGC GATTCTTCGC GCCATTGTGT CGGACGGCGC CGTGAGCATG
GTCGGTAAAG CTGAGTCGAT GGACGAACTT CGACAAGCGG TCTTGGCGGC TCGAGATGGT
CACGCGTACC TCGGACGTTC CATCATCGAA GCACTGGCGC ATCCGCAGGA TTGCGAGTGC
GAACGACCGC CGGCGCCGCG TTTGACGGGC AAGCAGGCCG AAGTTGTCAG GCTGCTGGTC
AGTGGCCAAT CGATCTCCGA CATCGCGGCT GCGCTCGGTT GCGATCGCCG CACGGTCACG
CGGCAAAAAC GCGAGGCAAT GGCAAAATTA GGCGTCACCA ATGATCCCGG TCTTTTCTCT
TACGTGCGTG CTTATGGAAT TCTTAATTTT TAA
|
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| Protein sequence | MRSHSYNKRE KILVSIRIIL ADDHPFVILG VRAALEMQAG ITVVDQATDP VSLIECLRST
PCDVLVTDLS MPDHSFAVDD GLNLVRRIRS CWPQLRIVVM TTLTNPAILR AIVSDGAVSM
VGKAESMDEL RQAVLAARDG HAYLGRSIIE ALAHPQDCEC ERPPAPRLTG KQAEVVRLLV
SGQSISDIAA ALGCDRRTVT RQKREAMAKL GVTNDPGLFS YVRAYGILNF
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