| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0621 |
|---|
| Symbol | |
|---|
| ID | 6283972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 675435 |
|---|
| End bp | 676244 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642620186 |
|---|
| Product | cytochrome c class I |
|---|
| Protein accession | YP_001894270 |
|---|
| Protein GI | 187922628 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2863] Cytochrome c553 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0823 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGG AACGCGTCTT CAGCTTGCGC AACCCATGGT TCACAGTGAG CGTGGGCGGC
ACGATTGCGA TTGCCGTCGT CGGGATACTA ATCGGCTTTA TCTGGCTGCC TTCGGCGAGT
AACGCGTTCG GCGACCGCAG CCTCTGGGCG ACCATCTGCA GCGCGGCGGG GGCGCCGTCG
AGCTGGTATG GCGGCGCCAA TCTCGCCGGC CCGGCGCCGA GCGACGTCGT GGTCTTGCCA
CCGTTGCGGC GCGCGCGGGC TGACGCGAAT TCGATCGGTC GCGGCGCGAC GATCGCGACA
CAAAATTGCT CGATGTGCCA TGGTGTACTC GGCACATCGC AGGTGACCGC GCCGGCATTG
GCCGGTCAAT ATGCCGACGT GGTCTACAAA GAGTTGCGCG ACTACCAGAA CGGCGTGCGC
CAGAACGCGA TCATGCAGCC GATCATCGCC GCACGCAGCG ATCAGGATCT GCACGATCTG
GCGGCTTACT ACGCGTCGCT GCCGAGAGCG CCTGCGGCGC AAACGCTGCC GACTGGCGTC
GAACCGGATG CGAACGCGGT GAAGCTTGCC ATGCAGGGCG ATCCGCAGCG CAATATCGCG
CCTTGCGCCG CATGTCACGG ACAGCTCGAC CGCAAGGGCG CGGCGCCGTG GCTGGGCGGA
CAATCGTCGA TCTATCTCGC CGCGCAGATG CGCGCGTTTG CTTCCGGCGC GCGGCATAAC
GACATCAATG AGCAGATGCG CAATGTGGCA CGGCAAATGA CGCCTGCCGA AATTGATAGC
GTCGCGAAAT ACTATGCGGC TATGCAGTAG
|
|---|
| Protein sequence | MNQERVFSLR NPWFTVSVGG TIAIAVVGIL IGFIWLPSAS NAFGDRSLWA TICSAAGAPS
SWYGGANLAG PAPSDVVVLP PLRRARADAN SIGRGATIAT QNCSMCHGVL GTSQVTAPAL
AGQYADVVYK ELRDYQNGVR QNAIMQPIIA ARSDQDLHDL AAYYASLPRA PAAQTLPTGV
EPDANAVKLA MQGDPQRNIA PCAACHGQLD RKGAAPWLGG QSSIYLAAQM RAFASGARHN
DINEQMRNVA RQMTPAEIDS VAKYYAAMQ
|
|---|
| |