Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0609 |
Symbol | |
ID | 6282338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 659698 |
End bp | 662571 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642620174 |
Product | excinuclease ABC, A subunit |
Protein accession | YP_001894258 |
Protein GI | 187922616 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.386582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.048507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAACAAA TCCGTATTCG TGGGGCTCGC ACCCACAACC TGAAGAACGT CAACCTCGAT CTACCCCGTC ACAAGCTCGT TGTCATCACG GGCCTTTCAG GCTCGGGCAA ATCGTCGCTG GCGTTCGACA CGCTTTATGC GGAAGGGCAA CGGCGCTACG TCGAAAGTCT CTCCGCCTAC GCGCGCCAAT TTCTGCAATT GATGGAGAAA CCGGACGTCG ATCTGATTGA AGGCCTGTCG CCGGCGATCT CGATCGAACA GAAGGCGACC TCGCACAATC CGCGCTCCAC GGTCGGCACC GTCACCGAGA TTCACGACTA TCTGCGGCTC CTGTTCGCAC GGGTCGGCAC GCCTTACTGT CCGGACCACG AAATTCCGCT GGAAGCGCAA AGCGTCTCGC AGATGGTCGA CGCCGCGCTC GCGTTGCCGG AAGAAACGAA GCTCATGATT CTCGCGCCCG TCGTGGCGAA TCGCAAAGGC GAGCACGTCG AACTGTTCGA GGAGATGCAG GCGCAAGGCT TTATCCGCTT CCGCGTGCGC TCGGGCGGCG GCACCGCCAA TGAAGGCGTC GCGAAGATCT ATGAAGTCGA TTCGCTGCCG AAGCTGAAGA AGAACGACAA GCACACCATC GACGTGGTCG TGGACCGCCT GAAAGTGCGT CCCGACATGA AGCAGCGTCT GGCCGAATCG TTCGAAACGG CACTGCGTCT CGCCGACGGC CGCGCGATCG CGCTCGAAAT GGACACGGAC AAGGAGCATC TGTTCAGTTC GAAGTTCGCT TGCCCGATCT GCTCGTACTC GCTGCAGGAA CTGGAGCCGC GCCTCTTCTC GTTCAACAAT CCGATGGGCG CGTGCCCGGA ATGCGACGGG CTCGGCCAGA TCACCTTCTT CGATCCGAAG CGGGTGGTCG CGCATCCGTC GCTGTCGCTC GCGGCGGGCG CGGTGAAGGG CTGGGACCGG CGCAACCAGT TTTACTTCCA GATGCTGCAG AGTCTCGCGG CGTTCTACGA ATTCGACATC GACACGGCCG TCGAAGACTT GCCGGAGAAA GTCCGCAAGA TCCTGCTGTT CGGTTCGGGC AAGCAGGAGA TCCCGTTCTC GTACATCAAC GAACGTGGCC GCACTTCGGT GCGCGAGCAT GTATTCGAAG GGATCATCCC GAATCTGGAG CGGCGTTACC GCGAGACCGA TTCGGTCGCG GTACGCGAAG AACTCGCCAA GTATCAGAAC AACCAGCCCT GCCCGGCCTG CGCCGGCACG CGTCTGCGGC GCGAAGCGCG CTTCGTGCGG ATCGGCTCAG ACGGCGATGC GCGCGGCATC TTCGAGATCA GCGGCTGGCC GTTGCGCGAC GCGCTCGGCT ATTTCCAGAC GCTGCGCCTG GAAGGATCGA AGCGCGAGAT CGCCGACAAG GTGGTCAAGG AGATCGTCGC GCGTCTGATG TTCCTGAACA ACGTCGGGTT GGATTACCTG TCGCTGGAGC GCAGCGCGGA AACGCTGTCC GGCGGCGAGG CGCAGCGCAT TCGCCTCGCG TCGCAAATCG GCTCAGGGCT GACCGGCGTG ATGTACGTGC TGGACGAGCC GTCCATCGGA CTGCATCAGC GCGATAACGA CCGGCTCATC GCCACGCTCA AGCATCTGCG CGACCTCGGC AACTCGGTGA TCGTCGTCGA ACACGACGAG GACATGATCC GCATGGCCGA CTACGTGGTC GACATGGGCC CGGGTGCGGG CGAACACGGC GGCATGGTGA TCGCCGAGGG CACGCCCAAA CAGGTGCAGG CGAACGCCGC GTCGATGACC GGGCAGTACA TGTCCGGCGC GCGCAACATC GAGTTCCCGG ACGAACGCAA GGCGCCCGAC GAAAAGCGTC TGCGCATCGT CGAGGCGTAC GGCAACAATC TGCAGCACGT GTCGCTGGAT CTGCCGGTCG GCTTGCTGAC CTGCGTGACC GGCGTGTCCG GTTCGGGCAA GTCCACGCTC ATCAACGACA CGCTGTACCA CGCGGTCGCG CATCACCTGT ACGGCTCGGC CACGGAGCCG GCGCCGTACG AATCGATCGA GGGCCTCGAG CACTTCGACA AGGTCATCAA CGTCGACCAG TCGCCGATCG GCCGCACGCC GCGCTCGAAC CCGGCCACCT ACACAGGTCT CTTCACGCCG ATCCGCGAAC TGTTCGCGGG CGTGCCCGCG GCCAAAGAAC GCGGCTACGA AGCCGGCCGC TTTTCGTTCA ACGTAAAGGG CGGCCGCTGC GAATCCTGCC AGGGCGACGG CGTGCTGAAG GTCGAGATGC ACTTTTTGCC GGACGTGTAC GTGCCGTGCG ACGTCTGTCA TGGCAAGCGC TACAACCGCG AAACACTGGA CGTGCAGTAC AAAGGCAAGA ACATCAGCGA AGTGCTCGAC ATGACGGTGG AGAACGCCTA TGAGTTCTTC AAGCCAGTGC CGGTCGTCGC TCGCAAGCTG AAAACCTTGC TGGACGTGGG TCTGGGCTAT ATCCGGCTGG GCCAGTCGGC CACCACGCTG TCGGGCGGCG AGGCACAGCG CGTCAAACTA TCTTTGGAAC TGAGCAAGCG TGACACGGGT CGCACGCTAT ACATACTCGA CGAGCCGACC ACCGGTTTGC ACTTTCATGA CATCGCGTTG TTGCTCGAAG TGATTCATCG ATTACGCGAC CAGGGTAATA CCGTCGTGAT CATCGAGCAT AATCTCGATG TAATAAAGAC TGCGGACTGG GTCATCGATC TCGGTCCGGA AGGCGGGGCC GGCGGCGGGC AGATCATCGC TCAGGGCACG CCGGAGCAGG TGGCCAAGTC GAAGGCAAGT TTTACCGGCA AGTACCTGGC GCCTCTGCTG AAACGCGCGG CCAGTAAAAA GTAA
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Protein sequence | MEQIRIRGAR THNLKNVNLD LPRHKLVVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY ARQFLQLMEK PDVDLIEGLS PAISIEQKAT SHNPRSTVGT VTEIHDYLRL LFARVGTPYC PDHEIPLEAQ SVSQMVDAAL ALPEETKLMI LAPVVANRKG EHVELFEEMQ AQGFIRFRVR SGGGTANEGV AKIYEVDSLP KLKKNDKHTI DVVVDRLKVR PDMKQRLAES FETALRLADG RAIALEMDTD KEHLFSSKFA CPICSYSLQE LEPRLFSFNN PMGACPECDG LGQITFFDPK RVVAHPSLSL AAGAVKGWDR RNQFYFQMLQ SLAAFYEFDI DTAVEDLPEK VRKILLFGSG KQEIPFSYIN ERGRTSVREH VFEGIIPNLE RRYRETDSVA VREELAKYQN NQPCPACAGT RLRREARFVR IGSDGDARGI FEISGWPLRD ALGYFQTLRL EGSKREIADK VVKEIVARLM FLNNVGLDYL SLERSAETLS GGEAQRIRLA SQIGSGLTGV MYVLDEPSIG LHQRDNDRLI ATLKHLRDLG NSVIVVEHDE DMIRMADYVV DMGPGAGEHG GMVIAEGTPK QVQANAASMT GQYMSGARNI EFPDERKAPD EKRLRIVEAY GNNLQHVSLD LPVGLLTCVT GVSGSGKSTL INDTLYHAVA HHLYGSATEP APYESIEGLE HFDKVINVDQ SPIGRTPRSN PATYTGLFTP IRELFAGVPA AKERGYEAGR FSFNVKGGRC ESCQGDGVLK VEMHFLPDVY VPCDVCHGKR YNRETLDVQY KGKNISEVLD MTVENAYEFF KPVPVVARKL KTLLDVGLGY IRLGQSATTL SGGEAQRVKL SLELSKRDTG RTLYILDEPT TGLHFHDIAL LLEVIHRLRD QGNTVVIIEH NLDVIKTADW VIDLGPEGGA GGGQIIAQGT PEQVAKSKAS FTGKYLAPLL KRAASKK
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