Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0604 |
Symbol | |
ID | 6280977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 654595 |
End bp | 655209 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642620169 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_001894253 |
Protein GI | 187922611 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0141585 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAACT TCCTGCTGTT TCTCGCCACG TCGATCGCCA TCACCATGGC GCCGGGCCCG GACAATCTGC AAGTGCTCGC GCGCGGTATC TCGCAGGGTC GCGCGGCGGG ACTGGTCGCG GCGCTCGGCT TTGCGGCCGG CATCACGTTT CACACGACGC TCGCCGCGCT CGGGGTGGCC GCGTTGCTGC GCTCGTCGCC GGTCGCCTTC GAAGTCATCA AACTGGCCGG CGCCGCGTAT CTGATCTGGA TCGGCATCAA GGCGCTGCGC AGCCAGGGTC TCGCAACCGC GCACGAACGC GCGCCGCAGC CGTTGATGGC GGTGTTTCGC CAGAGCGTGC TCGGCAATCT GCTGAATCCG AAGGTGACCT TGTTCTTCGT GGTGTTCTTG CCGCAGTTCG TGCAGCCGCA CGGCACGCAG AGCGTCACGT TGCAGATGCT CGAACTCGGC GTGCTGTTCA TGCTGCAAAC GGTGGCGGTG TTTTCACTCT TCGGCGTGTG CGCGGGAATG ATCGGCGGGT GGCTGAAACG CCGTCCGCGT GTCGGTGTGT GGCTGGATCG CCTGGCCGGC GCCACGTTCA TCGCAATCGG GATTCGCGTC GCGTTGCGCG ATTGA
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Protein sequence | MPNFLLFLAT SIAITMAPGP DNLQVLARGI SQGRAAGLVA ALGFAAGITF HTTLAALGVA ALLRSSPVAF EVIKLAGAAY LIWIGIKALR SQGLATAHER APQPLMAVFR QSVLGNLLNP KVTLFFVVFL PQFVQPHGTQ SVTLQMLELG VLFMLQTVAV FSLFGVCAGM IGGWLKRRPR VGVWLDRLAG ATFIAIGIRV ALRD
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