| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0601 |
|---|
| Symbol | |
|---|
| ID | 6280974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 650730 |
|---|
| End bp | 651713 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642620166 |
|---|
| Product | KpsF/GutQ family protein |
|---|
| Protein accession | YP_001894250 |
|---|
| Protein GI | 187922608 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation
[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0442241 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCGA AAATCAATGG CGACCGGGCA CTCGCGCTCG CTCGCGACGT GCTCGACATC
GAAGCGGACG CCGTGCGCGC GCTTCGCGAT CAACTCGACG ACGGTTTCGT CGGGGCGGTC
GACTTCATCC TGGGTTGCCG CGGGCGCGTT GTCGTTTCCG GCATCGGCAA ATCCGGCCAC
GTGGCCCGCA AGCTCGCGGC CACGCTCGCC AGCACCGGCA CGCCGGCGTT CTTCGTGCAT
CCCGCTGAAG CCAGCCACGG CGACCTCGGC ATGGTCACCG CCGACGACGT GTTCCTCGCG
CTGTCCAATT CCGGTGAAAC CGAAGAACTC GTGGCGATCC TGCCGCTCAT CAAGCGGCTC
GGCGCGAAGC TGATTGCCAT GACGGGCCGT CCGTCATCGA GTCTCGCACA ACTGGCCGAC
GTGCACCTGA ATTCCGGTGT GTCGAAAGAA GCCTGCCCGA TGAATCTTGC GCCTACCGCC
AGCACCACCG CCGCGCTCGC GCTCGGCGAC GCGCTCGCGG TCGCGGTGCT CGACGCGCGC
GGCTTCGGCC GCGACGACTT CGCGCGCTCG CATCCGGGCG GCGCGCTCGG CCGGCGCCTG
CTCACTTATG TGCGCGACGT GATGCGCACC GGCGACCAGG TGCCGAAGGT CACGCCCGAC
GCCACCGTGC GCGACGCGCT GTTTCAATTG ACCGCCAAGC GCATGGGCAT GACCGCGATC
GTCGATCACG AGGACCGCGT CGCCGGCATC TTCACCGACG GCGACTTGCG CCGCGTGCTC
GAACGCGACG GCGATTTCCG CGAGCTGTCG ATCGCCTCGG TCATGACCGC CGGCCCGCGC
ACCATCGGTC CGGATCAACT TGCGGTCGAA GCCGTGGAAC TGATGGAGCG CCACCGGATC
AATCAGATGC TGGTCGTCGA CGAAGCAGGC AAGCTGATCG GCGCACTCAA CATGCACGAC
CTGTTCTCGA AGAAGGTGAT CTGA
|
|---|
| Protein sequence | MIAKINGDRA LALARDVLDI EADAVRALRD QLDDGFVGAV DFILGCRGRV VVSGIGKSGH
VARKLAATLA STGTPAFFVH PAEASHGDLG MVTADDVFLA LSNSGETEEL VAILPLIKRL
GAKLIAMTGR PSSSLAQLAD VHLNSGVSKE ACPMNLAPTA STTAALALGD ALAVAVLDAR
GFGRDDFARS HPGGALGRRL LTYVRDVMRT GDQVPKVTPD ATVRDALFQL TAKRMGMTAI
VDHEDRVAGI FTDGDLRRVL ERDGDFRELS IASVMTAGPR TIGPDQLAVE AVELMERHRI
NQMLVVDEAG KLIGALNMHD LFSKKVI
|
|---|
| |