| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0513 |
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| Symbol | ugpQ |
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| ID | 6284463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 563676 |
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| End bp | 564464 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642620077 |
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| Product | cytoplasmic glycerophosphodiester phosphodiesterase |
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| Protein accession | YP_001894162 |
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| Protein GI | 187922520 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.333866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGGAAATG GGATTAATCG CACCTTATCC GCAGACTGGC CTTATCCGCG CCTGGCCGCC
CATCGCTGCG GCGGCACGCT GGCGCCGGAA AACACACTCG CGGGTTTCGA CGCCTGCGTG
CGCTACGGCT ACCGCATGGT CGAATTCGAC GCCAAGCTAT CCGCCGACAA CCAGCTCTTC
CTGCTGCACG ACGACACCCT CGAGCGCACC ACCAACGGCC ACGGCGCCGC CGCCGAGCAC
ACCTGGCAGC AGCTGGCAAC GCTCGACGCC GGCTCATGGT ACGGACCGCA ATTCGCCGGC
ACGCGGCTGC CGACGCTCGC CGAAGCGGCC GAGCGCTGCG CACGCGACGG CATTGCCGCG
AATATCGAAA TCAAGCCGTG TCCGGGCCGC GACGAGATCA CCGGCACGTT GGTGGCAAGC
GGCGCGCTGA CCTTGTGGCA AGGACAGAAG ACGCCGCCGC TGCTGTCGTC GTTTTCGTTC
GAGGCGCTCG CCGCAGCGCG CGACGCCGCG CCATCGCTGC AACGCGGCAT GCTGTTCGAC
GAAATTCCTG ACGACTGGCT GCGCATCGTG CGTGAACTGG ACTGTGTGTC GTTTCACGCG
AACCAGCGCT ATCTCACCGA GCGGCTGGTC GCGGAGGTTC ACTGCGCCGG CCTGCGCGTG
CTCGCCTACA CCGTCAACGA TCCGGCGCGC GCGCAATTGC TCGCGCAGTG GGGCGTCGAC
ATGATTTGTA CAGATCGCAT CGATACACTG CAACACGACA TGTTCCCGGC GCCGGCCAAC
CCGGCCTGA
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| Protein sequence | MGNGINRTLS ADWPYPRLAA HRCGGTLAPE NTLAGFDACV RYGYRMVEFD AKLSADNQLF
LLHDDTLERT TNGHGAAAEH TWQQLATLDA GSWYGPQFAG TRLPTLAEAA ERCARDGIAA
NIEIKPCPGR DEITGTLVAS GALTLWQGQK TPPLLSSFSF EALAAARDAA PSLQRGMLFD
EIPDDWLRIV RELDCVSFHA NQRYLTERLV AEVHCAGLRV LAYTVNDPAR AQLLAQWGVD
MICTDRIDTL QHDMFPAPAN PA
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