Gene Bphyt_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0427 
Symbol 
ID6282912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp472648 
End bp473676 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content66% 
IMG OID642619991 
ProductBile acid:sodium symporter 
Protein accessionYP_001894076 
Protein GI187922434 
COG category[R] General function prediction only 
COG ID[COG0385] Predicted Na+-dependent transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.866752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCC CGAAACTGCT TCCCGACAAC TTCACCCTGT GCCTCGTCGG CACCGTGATT 
TTTGCCAGCT TGCTGCCGGT TCACGGGCAG GCCGCCGTCG GGTTCAACTG GGTGACGAAC
GTGGCAGTCG GCCTGCTGTT TTTCCTGCAC GGCGCCAAGC TCTCACGCGA AGCGATCATT
GCGGGCGCGA CGCATTGGCG CCTGCATCTT GTGGTGCTGC TCAGCACGTT CGCGCTCTTT
CCGCTGCTCG GCCTCGCGCT TAAACCGCTC CTTTCGCCAC TTGTCACGCC GGCGCTCTAT
GCGGGGGTCC TCTTCCTCTG CACGCTGCCG TCTACGGTTC AGTCGTCGAT CGCGTTCACG
TCCATTGCCA AAGGCAACGT GCCGGCTGCC GTATGCAGCG CGTCGGCCTC GAGCCTGCTC
GGCATCTTCA TCACCCCGGC GCTCGTCAGC CTCGTCGTCA CCAATCAGGC GGCCGGCGGC
GGCGCTTCGC CGTGGCATAC GGTAGGCAAC ATCGTGCTGC AATTGCTGGT GCCGTTCGTG
GCCGGGCAGT TGCTGCGCCC GCTGATCGGC AAGTGGATCG AGCGCAATCG CGGCGTGCTC
AAGTTCGTCG ACCAGGGATC GATTCTGCTG GTGGTGTACG GCGCGTTCAG CGAGGCCGTC
AACGAAGGCC TGTGGCATCA GATTCCGCTC TCCGCGCTCG GCGGTCTGCT GCTGCTGTGC
GTTGTGCTGC TCGCGCTGGC TCTCGGCGTG ACGATATTCG TCAGCAAGCG GCTCGGCTTT
AGCCGTGCTG ACCAGATCAC CATCATTTTC TGCGGGTCGA AGAAGAGTCT CGCGGCCGGC
GTGCCGATGG CCAAGGTGAT CTTCGCCTCG CATGCGGTCG GCGCCGTCGT CTTGCCACTG
ATGCTGTTCC ACCAGATCCA GTTGATGGTG TGCGCCGCGC TCGCGCAGCG CTGGGGCGCC
CGCGACATGA GCGGCGAGAC CCACGCCGCT GCGCGCGAGC GGACCGCCGC CGCCGTTGCC
CGCCGGTGA
 
Protein sequence
MARPKLLPDN FTLCLVGTVI FASLLPVHGQ AAVGFNWVTN VAVGLLFFLH GAKLSREAII 
AGATHWRLHL VVLLSTFALF PLLGLALKPL LSPLVTPALY AGVLFLCTLP STVQSSIAFT
SIAKGNVPAA VCSASASSLL GIFITPALVS LVVTNQAAGG GASPWHTVGN IVLQLLVPFV
AGQLLRPLIG KWIERNRGVL KFVDQGSILL VVYGAFSEAV NEGLWHQIPL SALGGLLLLC
VVLLALALGV TIFVSKRLGF SRADQITIIF CGSKKSLAAG VPMAKVIFAS HAVGAVVLPL
MLFHQIQLMV CAALAQRWGA RDMSGETHAA ARERTAAAVA RR