Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0427 |
Symbol | |
ID | 6282912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 472648 |
End bp | 473676 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619991 |
Product | Bile acid:sodium symporter |
Protein accession | YP_001894076 |
Protein GI | 187922434 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.866752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCC CGAAACTGCT TCCCGACAAC TTCACCCTGT GCCTCGTCGG CACCGTGATT TTTGCCAGCT TGCTGCCGGT TCACGGGCAG GCCGCCGTCG GGTTCAACTG GGTGACGAAC GTGGCAGTCG GCCTGCTGTT TTTCCTGCAC GGCGCCAAGC TCTCACGCGA AGCGATCATT GCGGGCGCGA CGCATTGGCG CCTGCATCTT GTGGTGCTGC TCAGCACGTT CGCGCTCTTT CCGCTGCTCG GCCTCGCGCT TAAACCGCTC CTTTCGCCAC TTGTCACGCC GGCGCTCTAT GCGGGGGTCC TCTTCCTCTG CACGCTGCCG TCTACGGTTC AGTCGTCGAT CGCGTTCACG TCCATTGCCA AAGGCAACGT GCCGGCTGCC GTATGCAGCG CGTCGGCCTC GAGCCTGCTC GGCATCTTCA TCACCCCGGC GCTCGTCAGC CTCGTCGTCA CCAATCAGGC GGCCGGCGGC GGCGCTTCGC CGTGGCATAC GGTAGGCAAC ATCGTGCTGC AATTGCTGGT GCCGTTCGTG GCCGGGCAGT TGCTGCGCCC GCTGATCGGC AAGTGGATCG AGCGCAATCG CGGCGTGCTC AAGTTCGTCG ACCAGGGATC GATTCTGCTG GTGGTGTACG GCGCGTTCAG CGAGGCCGTC AACGAAGGCC TGTGGCATCA GATTCCGCTC TCCGCGCTCG GCGGTCTGCT GCTGCTGTGC GTTGTGCTGC TCGCGCTGGC TCTCGGCGTG ACGATATTCG TCAGCAAGCG GCTCGGCTTT AGCCGTGCTG ACCAGATCAC CATCATTTTC TGCGGGTCGA AGAAGAGTCT CGCGGCCGGC GTGCCGATGG CCAAGGTGAT CTTCGCCTCG CATGCGGTCG GCGCCGTCGT CTTGCCACTG ATGCTGTTCC ACCAGATCCA GTTGATGGTG TGCGCCGCGC TCGCGCAGCG CTGGGGCGCC CGCGACATGA GCGGCGAGAC CCACGCCGCT GCGCGCGAGC GGACCGCCGC CGCCGTTGCC CGCCGGTGA
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Protein sequence | MARPKLLPDN FTLCLVGTVI FASLLPVHGQ AAVGFNWVTN VAVGLLFFLH GAKLSREAII AGATHWRLHL VVLLSTFALF PLLGLALKPL LSPLVTPALY AGVLFLCTLP STVQSSIAFT SIAKGNVPAA VCSASASSLL GIFITPALVS LVVTNQAAGG GASPWHTVGN IVLQLLVPFV AGQLLRPLIG KWIERNRGVL KFVDQGSILL VVYGAFSEAV NEGLWHQIPL SALGGLLLLC VVLLALALGV TIFVSKRLGF SRADQITIIF CGSKKSLAAG VPMAKVIFAS HAVGAVVLPL MLFHQIQLMV CAALAQRWGA RDMSGETHAA ARERTAAAVA RR
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