| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0425 |
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| Symbol | |
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| ID | 6283514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 469324 |
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| End bp | 470310 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642619989 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_001894074 |
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| Protein GI | 187922432 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.401963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACAA CCATCCGCGA CGTCGCCCGC GCGGCCAGCG TGTCGATCGG CACCGTCTCA
CGCGCACTGA AAAACCAGCC CGGCCTTTCC GAGGCCACCC GCGAGCGCGT CGTCGAAGCG
GCGCGCAAGC TGGGCTATGA CGCTGCCCAG TTGCGCCCGC GCATCCGCCG CCTCACGTTT
CTGCTGCACC GTCAGCACAA TAATTTTGCC GTCAGTCCGT TCTTCTCCCA TGTGCTGCAC
GGCGTGGAAG ACGCCTGCCG CGAGCGCGGC ATCGTGCCGT CCGTGCTGAC CGCCGGCCCC
ACCGAAGACG TGATCCAGCA GATGCGCCTG CATGCGCCGG ACGCGGTGGC GATCGCCGGT
TTCGTCGAGC CGGAAACGCT GACCACGCTG GTGGCCATGC AGCGCCCGCT CGTGCTGATC
GACCTGTGGG CACCCGGCAT GCGCTCGGTG AATCTCGACA ACGCCGCGGG CGCCACGCTC
GCCATGCGGC ATCTGTTCGA GCAGCAGCGC AAGCGCGTCG CGTTCATCGG CGGCTCGCTC
GCGCACTTCA GCATCGCGCA GCGCGCGCTC GGCTACCGGC GCGCGTTCTT CGAGGCGGGC
TTGCTGTTCG ACCCGTCGCT CGAAGTGACG ATCGACGCCG GCCTCGACCC CGACAGCGGC
GCCGCGCGCG CCATGCATCA ATTGCTCGAC GCGCCGGGTC CGCGCCCGGA CGCCGTGTTC
GCCTACAACG ACGCCGCCGC GCTCGCCGCG CTGCGCGCGT GCCTCGCACG CGGACTACGC
GTGCCCGAGG ACATTGCCAT CATCGGTTTC GACGACATTC CGGCCGCCGC CCATGCCACG
CCGCCGCTGT CGACCATCTC GGTCGACAAG GAAGCGCTCG GCCGGCGCGG CGTCGAGCTG
CTGCTTGAAG ACGCACCTGC CGAACTGGAA GTCCGTTTGC CCGTCCATCT CATTGCCCGT
GCCAGTACTT TGGTGAAAAT GCCATGA
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| Protein sequence | MATTIRDVAR AASVSIGTVS RALKNQPGLS EATRERVVEA ARKLGYDAAQ LRPRIRRLTF
LLHRQHNNFA VSPFFSHVLH GVEDACRERG IVPSVLTAGP TEDVIQQMRL HAPDAVAIAG
FVEPETLTTL VAMQRPLVLI DLWAPGMRSV NLDNAAGATL AMRHLFEQQR KRVAFIGGSL
AHFSIAQRAL GYRRAFFEAG LLFDPSLEVT IDAGLDPDSG AARAMHQLLD APGPRPDAVF
AYNDAAALAA LRACLARGLR VPEDIAIIGF DDIPAAAHAT PPLSTISVDK EALGRRGVEL
LLEDAPAELE VRLPVHLIAR ASTLVKMP
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