| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0418 |
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| Symbol | |
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| ID | 6284704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 460835 |
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| End bp | 463273 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642619982 |
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| Product | filamentous haemagglutinin family outer membrane protein |
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| Protein accession | YP_001894067 |
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| Protein GI | 187922425 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01731] adhesin HecA family 20-residue repeat (two copies)
[TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.740243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.11734 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAA CTCCTCCTCG TATCATTGAC AGCAAGAGCC GGACGGTCTG GTTCGCCGCA
CGCGCCAGCG CATTTGCCGC GTTGTGCGCA TTCGGCATGC AGCCGCTTGT CGCAAGCGCG
CAAGCAAAGC TGACCATTAC CCCCGACGCG GGCGCGGCCA CGCGCCCGAC GATCGGCACA
TCGAGCAACG GCACCCAGGT CGTCAATATC GTTGCGCCTA ATGCCGCAGG TGTGTCGAGC
AATCGCTTCT CGGACTACAA CGTCGGCACG GGCGGCGTGA TCATCAACAA CGCCACGCAG
GCCGCGCAAA CGCAGATCGG CGGCACGGTC CAGGCAAACT CCGTGCTCGG CAAGCAGGGC
GCGAAACTGG TCCTGATGCA GGTTACGTCG GGCGCGCAGT CGCAGTTGCT CGGCACCACT
GAGATCGCCG GCAACAGTGC CAATCTCGTG CTCGCCAACC CGGCAGGCAT CACGTGCTCG
GGCTGCGGCT TCCTGAACGC GCCGCGCGTC ACGTTGGCAA CCGGCACGCC GACGCTGAAA
AGCGACGGCT CGCTGGATAC GATCGACGTG AAGCAAGGCA CGCTTGCGGT GGACGGCGGC
GGCCTGAACG GCTCGACGAG CGCGGTCGAT CTGATCGCGC GTGCGATCAC GATCAACGGC
AAGGTGCAAG GCAAATCGAT CGATGCGATT GCTGGCGCCA ACCGCGTCAA TTACGCGTCG
AAGTCCGCGC TCGCTCAGGC CGGCACGGGC AGCGCTCCGC AGGTGGCGAT CGATGTGCAG
TCGCTCGGAA GCATGTACGG CGACGGCGCC GTGCGTCTGC TCGGCACCGA AGCGGGTGTC
GGCGTGCGCG ACAACGGCAC GCTGACTTCA CTGACCGGCA ACCTGAGCGT CGGTGCCAAC
GGCGACGTCA CGATCGCTGT GCCCGCGAGC ATCAAGGCGG CAGGCAACGC TGCGATCAAC
GGCGCGAACG TGACGAACGA CGGCTCCATC GCCGCCAGTG GCAGCATGGA CGTTCACGCT
ACTCAGGCGC TCGCCAATCG CGGCACGATC ACGGCCGACA GCATGAGCCT GATCGCCAAC
ACGCTATCGA ACGCGGGCAA AGTCGCCGCG AACGGCATCC GCATGGGTGG CGACCGGTCG
CTGATTAACA CCGGCACAAT CGAAGCTGCG CAACAGGCGG AACTGGCGGG CGACAGCATG
ACGCTTGCGG CCGATAGCAG CGTGAACAGT GCAAATGTGA CCTTGAGGGG CGGCACCATC
ACGAACCAGA GCAACGCGGT GAACGCGAGC CGATTCCTCA ATATCAACGC GGACCACATC
GACAACGCAG GCACGCTGAG TTCGGGTGGC GGTGCCTATG TCAACGCGAT GAGCACGTTC
GCCAACGGCG CCAACGGCAC GCTGACTGCG CAGGACAACG TTCAGATCGG CGGTGGCAAT
GTAACAAACG ACGACCTGAT CGCCAGCGCG CGCTCGTTGG ACGCCAACGG TGCCTTGAGC
TTGACCAATC GCGGCACCCT CACGGCCGGT GATGCCATGA ACCTGTCGAC CCGCGGCTCG
CTGCTGAACA GCGGCAAGAT GTCGGCGGCG AGTCTCAGCA TGACCGCCGA CCAGTCGTTG
ACGAATAGCG GCACGATCGA CGCGACGACG CAGGCAACGC TGGCATCCAA CAATCTGATG
CTGTCGGGCG GCAGCGTGAA AGGTGGCACG GTAACGCTGA ACGGAGGCAC CGTCACGAAC
CAGAACGCAA CGGTGAACGC CGGCCAGCTT CTCGACATTC GCGCGGACAA CGTGGAGAAC
ACCGGCACGC TGAGTTCGAA CGGCGATGCA CGCGTCAACG CGATGAACAC GTTCATGAAC
GGCGCGAACG GCACGCTGAC CGCACAGAAC AACGTGCAGA TCGGCGGGAC GACGCTGAAC
AACAGCAACG GCAGCATCGA GGCGGTGAAG GGCACGCTAT CCGTACAGGC CAGCACGATC
GCCAACCTGA ACGGCAAGCT GTCGTCGGGC AACGCGATGT CGATCAATAC GCGCGGCGAC
CTCGACAATA CGGGCGGCAC GATCACCGCG GGGCGTGATG GGCAGATAGA CGTCGGCGGC
AAGTTGACGA ACGACAACGG CTCGATCACG TCGCAAGCGG CGGTACGCGG CACGGCGGGG
TCGATGTCGA ATGTCGGCGG CACGATCTCG GCGCCGATCT CCGCGGAAAT TCGTGTCGTC
GGCGATAACG ACCGCAACAA CGGCGGCTTC ATCCCGCCGG TCAATCCGAC GCCGGAGCCG
GAGCGGACGC CGGCGCCGAA GCCGGAGCCG ACTCCGACAA CGTTCGTTCC GCCTCCCGGC
TTTGTTCGCA TGGATCCCCA TTCGCCTGAT CTTAACAAGT ACAGCGGTTT CTACGATCAG
GACGGCTACT TCTACGCGCG AATCTTCATG CCGAGCTAA
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| Protein sequence | MQKTPPRIID SKSRTVWFAA RASAFAALCA FGMQPLVASA QAKLTITPDA GAATRPTIGT
SSNGTQVVNI VAPNAAGVSS NRFSDYNVGT GGVIINNATQ AAQTQIGGTV QANSVLGKQG
AKLVLMQVTS GAQSQLLGTT EIAGNSANLV LANPAGITCS GCGFLNAPRV TLATGTPTLK
SDGSLDTIDV KQGTLAVDGG GLNGSTSAVD LIARAITING KVQGKSIDAI AGANRVNYAS
KSALAQAGTG SAPQVAIDVQ SLGSMYGDGA VRLLGTEAGV GVRDNGTLTS LTGNLSVGAN
GDVTIAVPAS IKAAGNAAIN GANVTNDGSI AASGSMDVHA TQALANRGTI TADSMSLIAN
TLSNAGKVAA NGIRMGGDRS LINTGTIEAA QQAELAGDSM TLAADSSVNS ANVTLRGGTI
TNQSNAVNAS RFLNINADHI DNAGTLSSGG GAYVNAMSTF ANGANGTLTA QDNVQIGGGN
VTNDDLIASA RSLDANGALS LTNRGTLTAG DAMNLSTRGS LLNSGKMSAA SLSMTADQSL
TNSGTIDATT QATLASNNLM LSGGSVKGGT VTLNGGTVTN QNATVNAGQL LDIRADNVEN
TGTLSSNGDA RVNAMNTFMN GANGTLTAQN NVQIGGTTLN NSNGSIEAVK GTLSVQASTI
ANLNGKLSSG NAMSINTRGD LDNTGGTITA GRDGQIDVGG KLTNDNGSIT SQAAVRGTAG
SMSNVGGTIS APISAEIRVV GDNDRNNGGF IPPVNPTPEP ERTPAPKPEP TPTTFVPPPG
FVRMDPHSPD LNKYSGFYDQ DGYFYARIFM PS
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