| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0400 |
|---|
| Symbol | |
|---|
| ID | 6282877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 437549 |
|---|
| End bp | 438007 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642619963 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_001894049 |
|---|
| Protein GI | 187922407 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.914468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACACTCG ATACGTTCTC TCAAAAAATC CTGCGCCTAT TGCAGCTCGA CGCACGCCGC
TCGGTGCAAG AAATTTCCGA CCAGGTCGGC CTGTCGAGCA CGCCATGCTG GCGGCGCATC
AAGGACATGG AACAGTCGGG GGTCATTCAG CGCTACACGG CGCTGCTGGA TCGAGAAAAA
CTCGGGCTGC ACGTGTGCGC GCTCGCGCAT ATTCATCTCA CGCGGCACAC CGAAGGCGGC
GTGGAACAGT TCGAGCGGGA AATCGCCACC TGTCCGGAAG TCACGGAGTG CTACAGCACG
ACCGGCGAAT CGGACTACAT CCTCAAGATC GTCGCGCCGG ACATCAAGGC GTACGACAGC
TTTTTGCACG AGCGCATCTT CAAGATTCCC GCCGTCGCGC AGGTTCGCAC GAGTGTGGTG
CTGCGCGAGA TCAAATTCGA TACGCAACTG CCGCTGTGA
|
|---|
| Protein sequence | MTLDTFSQKI LRLLQLDARR SVQEISDQVG LSSTPCWRRI KDMEQSGVIQ RYTALLDREK
LGLHVCALAH IHLTRHTEGG VEQFEREIAT CPEVTECYST TGESDYILKI VAPDIKAYDS
FLHERIFKIP AVAQVRTSVV LREIKFDTQL PL
|
|---|
| |