Gene Bphyt_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0396 
Symbol 
ID6282873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp433133 
End bp434254 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content69% 
IMG OID642619959 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001894045 
Protein GI187922403 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGT TCTTCATTGC CGGCATGATG TACGCGTCCT GGGGCGTGCA CGTGCCGACG 
GTGCGTGACC GTTTTCATCT GAACGCGGCG CTGCTCTCAT TCGCGTTGCT GGCTGTCGCC
GGCGGCTCGA TCGGCGCGAT GGCGGCCAAT GCTTCATGGA TCGCGCGGGT CGGCACGCGT
CGCGCCTGCC TCGCCGGCGG CCTCGTGATG GCGGTATGCG CGGCGCTGAT TCTGGTCGTG
CCCGCATACT GGATGCTGCT GGTGGTGCTG GCCACCTTCG GCGCCGGCAT GGCCACTCTG
GATGTCGCGA TGAACGCCGA GGCGAGCGCC GTTGAGAAAG CGCTCGGCAA GCCGATCATG
TCGTCGTTGC ACGGCATGTT CAGCGTCGGC GGGATGTTCG GTGCGGCGGT CGGCGGGGCG
CTGCTGTCGC GCGGCATGGC GCCGGCGGTG CATCTCGCGC TGGCTGCCGC GGTCAGCGCA
CTCGTGCTGA TCGCCGCCTG TCCTTCCGTG CTGCCGCACG TGCCGCATGC CGATCATCCC
GACTCCGCCA CGCCGCGCGC GAATCGCTGG CGCTCGCCGG CGTTGTGGGC GCTCGGTGCA
ATGGCGCTGG TGGCGCTAAT CGCCGAAGGC GCGATGTACG ACTGGGCCAC TGTCTATATG
CGCGACGTCG TGCTCGCCAC GCCCGCGCTC GCGAGCGCGG CCTACGCGGC GTTCTCGGGC
GGCATGGCGG CCGCGCGCTT CGGCGGCGAC GCCGTGCGCG CCCGCTTCGG CGCACCGCAA
CTGGTGATGG CAAGCGCGGC GCTCGCCTGC GTCGGGATGG TCGGCGCGCT GCTGCTGCCG
AATGCGGTTG CGGCGCTAAT CGGCTTCACG CTGATGGGTC TTGGGCTCGC GAACATGATG
CCCGTGCTAT TCGCGGCGGC GGCGAGCGTC AAAGGCATTC ATCCGGCGGA AGGACTCGCG
CACGTTGCCG GGTTGGCGTA CTTCGGGCTG CTGCTCGGGC CGGTGATCAT CGGCGCGGTG
ACCCAGGTGA CCAGTTTGCC GATCGGGTTG TCGGTGGTGG CGCTCTGTTC CGCGTTGATC
GCGCTGGTCG GTCCGAAGAT TCTGCGGCGT TTGAAGATCT GA
 
Protein sequence
MAVFFIAGMM YASWGVHVPT VRDRFHLNAA LLSFALLAVA GGSIGAMAAN ASWIARVGTR 
RACLAGGLVM AVCAALILVV PAYWMLLVVL ATFGAGMATL DVAMNAEASA VEKALGKPIM
SSLHGMFSVG GMFGAAVGGA LLSRGMAPAV HLALAAAVSA LVLIAACPSV LPHVPHADHP
DSATPRANRW RSPALWALGA MALVALIAEG AMYDWATVYM RDVVLATPAL ASAAYAAFSG
GMAAARFGGD AVRARFGAPQ LVMASAALAC VGMVGALLLP NAVAALIGFT LMGLGLANMM
PVLFAAAASV KGIHPAEGLA HVAGLAYFGL LLGPVIIGAV TQVTSLPIGL SVVALCSALI
ALVGPKILRR LKI