| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0384 |
|---|
| Symbol | |
|---|
| ID | 6282109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 418275 |
|---|
| End bp | 419072 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642619947 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_001894033 |
|---|
| Protein GI | 187922391 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAACC CCGAAGAATT GATCCGCGAG AGCGTAGCGC CCAAAGATTT CGTTGCAGTG
AGCTGGAACC TGCATAAAGG CCGCACACCG CTCGGCTTTC AGGCCTGGCA GGCCATGCAG
CGCTGGGTGC AATCGACCCA CGCGGACGCC TATTTTTTAC AGGAAGCGAT GGCGCGGCGC
ATGCCGTCGC CGGTATTGGC GAGCAGTTTC GGCTCGCCGC TCGCCGATCC GTTGAGCGAT
GTCTGGCATT GCCAGGCCAC TGAAATCGCG CGCGCGCTCG AACTCGAAAT TGCGCTCGGC
CCGAACGTCT TCAAACCGTC GTGGCGGCAT GGCAATGCGA TCCTGTCGCC GCATCCACTC
GATCTTGGCG GACGCTGGGA CATCTCCGCG CATCGCTTCG AAAAGCGTGG TTTGCTGGTG
GCGCGCGCGA CTTTCGGTGG TCACTCGGTC ACGCTGCTGT GCGCGCATCT TGCGCTGACG
CGTTCGGCCC GCTTGCGTCA GATGAACTGG ATCGCGCACT GGATCGCAAA GGAAGCGCCT
GAGGGTCCGC TAGTGCTCGC CGGCGACTTC AACGATTGGC GCAACGATTC GGTGCCGCTG
TTCGGCGAAC ATGGTTTGCA GGAAGTGGCC ACGCTGCTCG GCGAGTCGGG CCGCACCTTT
CCGGCTTTCT CGCCTGCGCT CGCCCTCGAC AAAATGTTCG TGCGCGGCAT GAAGCCGATC
GAATGGATCC AGCCTACGCA GGAGACTGCC TGGCTCTCGG ATCACTTGCC GTATATGGCG
CGCTTGCGGG TCGAATAG
|
|---|
| Protein sequence | MRNPEELIRE SVAPKDFVAV SWNLHKGRTP LGFQAWQAMQ RWVQSTHADA YFLQEAMARR
MPSPVLASSF GSPLADPLSD VWHCQATEIA RALELEIALG PNVFKPSWRH GNAILSPHPL
DLGGRWDISA HRFEKRGLLV ARATFGGHSV TLLCAHLALT RSARLRQMNW IAHWIAKEAP
EGPLVLAGDF NDWRNDSVPL FGEHGLQEVA TLLGESGRTF PAFSPALALD KMFVRGMKPI
EWIQPTQETA WLSDHLPYMA RLRVE
|
|---|
| |