Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0320 |
Symbol | |
ID | 6281547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 344546 |
End bp | 345328 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642619883 |
Product | 2-dehydro-3-deoxyglucarate aldolase |
Protein accession | YP_001893969 |
Protein GI | 187922327 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCT TCACCAATCC CCTCAAGTCA CGCCTCAAAG AAACCGATCC GCTGTTCGGA CTGTGGCTCT CGCTCGGCAG CGACGCCGCC GCCGAAGCGC TCGCGCACGC CGGTTACGAC TGGCTGCTGA TCGACATGGA GCACTCGCCG AACGATAGCG GCGACGTCAC CTCGCAATTG CGCGCGATCG CCGCCGCGCA TCTGCCGAGC GAGCCGGTGG TACGTGTGCC GTCGAGCGAA GCATGGCTCG TCAAGCGCGT GCTAGATGCC GGCGCGCGCA CGCTGATGTT CCCGAATATC GAGTCCGCTG ACGAGGCTGC GCGTGCGGTG CGTCTCACGC AGTATCCGAG CGCCGGCGCG CTCGACGGTG AGCGCGGCGT CGCCGGTGCG GTGCGCGCCG CGGGCTACGG CATGCGGCGC GACTACGTGC AAACGGCCAA CGCGCAGATC GCGACCATCG TGCAGATCGA GTCGGCGCGC GGCTTGCAGG AGGTGGAAAA GATCGCGGCG ACGCCGGGCG TCGATTGCCT GTTCGTCGGG CCAGCCGATC TTGCCGCGAG CCTCGGTCAT CTCGGCGATT CGAAGCACGC CGACGTGCAG GCCGCGATGG CGCGCATCGT CAGCGCTGCG GACAAGGCGG GCATTGCCGC CGGTATTTTT GCCATGGACG TCGCGAGTGC CAAGCAGCAT CGCGATGCCG GTTTTCGATT CATCGCTCTG GCCGCCGACG TCATGTGGAT GTTGCGCGCA ACTCGCCAGG CGTTGCAGGA GGTAAGGTCA TGA
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Protein sequence | MSTFTNPLKS RLKETDPLFG LWLSLGSDAA AEALAHAGYD WLLIDMEHSP NDSGDVTSQL RAIAAAHLPS EPVVRVPSSE AWLVKRVLDA GARTLMFPNI ESADEAARAV RLTQYPSAGA LDGERGVAGA VRAAGYGMRR DYVQTANAQI ATIVQIESAR GLQEVEKIAA TPGVDCLFVG PADLAASLGH LGDSKHADVQ AAMARIVSAA DKAGIAAGIF AMDVASAKQH RDAGFRFIAL AADVMWMLRA TRQALQEVRS
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