Gene Bphyt_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0320 
Symbol 
ID6281547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp344546 
End bp345328 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID642619883 
Product2-dehydro-3-deoxyglucarate aldolase 
Protein accessionYP_001893969 
Protein GI187922327 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT TCACCAATCC CCTCAAGTCA CGCCTCAAAG AAACCGATCC GCTGTTCGGA 
CTGTGGCTCT CGCTCGGCAG CGACGCCGCC GCCGAAGCGC TCGCGCACGC CGGTTACGAC
TGGCTGCTGA TCGACATGGA GCACTCGCCG AACGATAGCG GCGACGTCAC CTCGCAATTG
CGCGCGATCG CCGCCGCGCA TCTGCCGAGC GAGCCGGTGG TACGTGTGCC GTCGAGCGAA
GCATGGCTCG TCAAGCGCGT GCTAGATGCC GGCGCGCGCA CGCTGATGTT CCCGAATATC
GAGTCCGCTG ACGAGGCTGC GCGTGCGGTG CGTCTCACGC AGTATCCGAG CGCCGGCGCG
CTCGACGGTG AGCGCGGCGT CGCCGGTGCG GTGCGCGCCG CGGGCTACGG CATGCGGCGC
GACTACGTGC AAACGGCCAA CGCGCAGATC GCGACCATCG TGCAGATCGA GTCGGCGCGC
GGCTTGCAGG AGGTGGAAAA GATCGCGGCG ACGCCGGGCG TCGATTGCCT GTTCGTCGGG
CCAGCCGATC TTGCCGCGAG CCTCGGTCAT CTCGGCGATT CGAAGCACGC CGACGTGCAG
GCCGCGATGG CGCGCATCGT CAGCGCTGCG GACAAGGCGG GCATTGCCGC CGGTATTTTT
GCCATGGACG TCGCGAGTGC CAAGCAGCAT CGCGATGCCG GTTTTCGATT CATCGCTCTG
GCCGCCGACG TCATGTGGAT GTTGCGCGCA ACTCGCCAGG CGTTGCAGGA GGTAAGGTCA
TGA
 
Protein sequence
MSTFTNPLKS RLKETDPLFG LWLSLGSDAA AEALAHAGYD WLLIDMEHSP NDSGDVTSQL 
RAIAAAHLPS EPVVRVPSSE AWLVKRVLDA GARTLMFPNI ESADEAARAV RLTQYPSAGA
LDGERGVAGA VRAAGYGMRR DYVQTANAQI ATIVQIESAR GLQEVEKIAA TPGVDCLFVG
PADLAASLGH LGDSKHADVQ AAMARIVSAA DKAGIAAGIF AMDVASAKQH RDAGFRFIAL
AADVMWMLRA TRQALQEVRS