Gene Bphyt_0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0318 
Symbol 
ID6283268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp343247 
End bp343879 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content61% 
IMG OID642619881 
ProductRadical SAM domain protein 
Protein accessionYP_001893967 
Protein GI187922325 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTACG CGGTCAAAGA AATCTTCTAC ACGTTGCAGG GCGAGGGCGC GAATGCCGGG 
CGTCCGGCCG TCTTTTGCCG GTTCGCCGGC TGCAATCTGT GGTCGGGCCG CGAAGAAGAT
CGTGCCGAGG CGGTGTGCCG CTTCTGCGAT ACCGATTTCG TCGGCACCGA CGGCGAGAAC
GGTGACAAGT ACCGCACGGC TGACGATCTC GTGAAGATGA TCGCGGCGCA ATGGCCTGAA
GGCGAGGGCG AGCGTTTCGT GGTGTGCACG GGCGGCGAAC CGATGCTGCA GATCGATCAA
CCGTTGGTCG ACGCGCTGCA TGCCGCCGGC TTCGAAATCG CCATCGAAAC CAACGGCTCG
CTGCCGGTGC TCGAAACGAT CGACTGGATC TGCGTGAGCC CGAAGGCCGA CGCGCCGCTC
GTCGTGACCA AAGGCAACGA ATTGAAGGTC GTGATTCCGC AGGACAACCA GCGTTTGTCC
GAGTATGCGA AGCTCGACTT CGAGTATTTC CTCGTCCAAC CCATGGACGG TCCGTCGCGC
GACCTCAACA CCAGGCTCGC GATCGACTGG TGCAAACGCC ATCCGCAATG GCGCCTGTCG
ATGCAGACCC ACAAGTATCT GAACATTCCC TGA
 
Protein sequence
MTYAVKEIFY TLQGEGANAG RPAVFCRFAG CNLWSGREED RAEAVCRFCD TDFVGTDGEN 
GDKYRTADDL VKMIAAQWPE GEGERFVVCT GGEPMLQIDQ PLVDALHAAG FEIAIETNGS
LPVLETIDWI CVSPKADAPL VVTKGNELKV VIPQDNQRLS EYAKLDFEYF LVQPMDGPSR
DLNTRLAIDW CKRHPQWRLS MQTHKYLNIP