Gene Bphyt_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0311 
Symbol 
ID6283227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp334842 
End bp335486 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content61% 
IMG OID642619873 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_001893960 
Protein GI187922318 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGCA TCACCCATTT CGAGTTTTTC GTCGTCGCGG TCTTTCTTTT GAACGTGACG 
CCCGGTCCCG ATACGGCTTA TATCGTTGGG CGCAGTGTCG CTCAAGGCCG CGGGGCGGGA
CTCATGTCGG CGCTTGGCAT TTCCGCCGGC TGCTGCGTTC ACTCGCTGGC CTGCGCGTTC
GGCTTGACCG CGTTGCTGGC CGCGTCGGCC ACTGCATTTA CGGTGATCAA GTTCGTCGGC
GCTATTTATC TGATGTATCT CGGCGTGCGC CTGCTCTTCG CCAAGCCGGC TGCCGCCGAT
GGCGCTGCGG GCGAAGCGCA CGCGGCCGGC GCACCCAAGT CGCTACGCCA GCTTTTCCTG
CAAGGCTTCT GGACTAACGT TCTGAACCCC AAGGTAGTGC TGTTTTTCGT GTCGTTCTTC
CCGCAATTCG TGACGACCGG CAGCGACCAC AAAGCGCTCG CCTTCCTCAC GCTGGGCGCG
GTGTTCGTCA TGATGAGCAT GGTCTGGAAC AGTTTTGTCG CGTGGATCGC GGGCAGTGTG
ACGCGGCGTT TCTCTGGCCA GCCGTCCGTG AAGAAGTGGC TGGATCGCGG CGTCGGCAGC
GCTTTTGTCG GCTTGGGTAT CAAGCTCGCC ACCGCATCAA GATGA
 
Protein sequence
MFGITHFEFF VVAVFLLNVT PGPDTAYIVG RSVAQGRGAG LMSALGISAG CCVHSLACAF 
GLTALLAASA TAFTVIKFVG AIYLMYLGVR LLFAKPAAAD GAAGEAHAAG APKSLRQLFL
QGFWTNVLNP KVVLFFVSFF PQFVTTGSDH KALAFLTLGA VFVMMSMVWN SFVAWIAGSV
TRRFSGQPSV KKWLDRGVGS AFVGLGIKLA TASR