| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0309 |
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| Symbol | def |
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| ID | 6284012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 333206 |
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| End bp | 333709 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642619871 |
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| Product | peptide deformylase |
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| Protein accession | YP_001893958 |
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| Protein GI | 187922316 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTAC TCAACATCCT CAATTACCCG GACAAACGGC TGCACAAGAT CGCCAAGCCG
GTCGAAGCGG TCAACGACCG CATCCGCCGC CTCGTCAAGG ACATGGCCGA AACCATGTAC
GCCGCGCCGG GCGTCGGCCT TGCCGCGACC CAGGTGGACG TGCACGAGCG CGTGATTACG
ATCGACGTGT CGGACGACCA CAACGAACTG CTCGCCTTCA TCAACCCCGA AATCATCTGG
TCGAGCGACG AAAGGAAGCT CTCGGAAGAG GGCTGTCTTT CGGTGCCTGG CATTTACGAC
AACGTCGAGC GTGCCGAGAA GGTGCGCGTG CGGGCGCTCA ACGAGAAGGG CGAGACCTTC
GAGATGGACT GCGAAGGCCT GCTCGCGGTG TGCATCCAGC ACGAAATGGA TCATCTGATG
GGCCGCGTGT TCGTCGAGTA CCTGTCGTCG CTGAAGCAGA CGCGCATCAA GAGCAAGATG
AAGAAGCTCG CCCACGCGAT GTAA
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| Protein sequence | MALLNILNYP DKRLHKIAKP VEAVNDRIRR LVKDMAETMY AAPGVGLAAT QVDVHERVIT
IDVSDDHNEL LAFINPEIIW SSDERKLSEE GCLSVPGIYD NVERAEKVRV RALNEKGETF
EMDCEGLLAV CIQHEMDHLM GRVFVEYLSS LKQTRIKSKM KKLAHAM
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