Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0174 |
Symbol | |
ID | 6281769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 188413 |
End bp | 190002 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642619748 |
Product | putative DNA primase, DNA transfer TraO-like protein |
Protein accession | YP_001893837 |
Protein GI | 187922195 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.85378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0914571 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGATG ACACCGCAAT TTCTTCCGGG CCGCCTGCGG ACGAACCGGT CATCAACGTG ATCGAGCCGG ACCCGCCCCC ACTGCCGGAT CCGCAGGGCG GCGCCGGGGG CGCGGAGCGC TTCGATCAGA TGGCAGCCGA TGCACTGGCC GCACGCCGAC GCCGTGAGTT CGATGCGGCG CGCTCGCGGC TGCGCGATCG GGCCATCCAG GCGGATGCTC CGTCGCAGGA TGCCGCACAG CATCCGGCAC CGCAGTGGGC AACGCAGCCA AGGGCACCAC GTGGCAGCGG CGACGCACCT TCCGTGCAGT GGGTGCCGCT TGGCAATCCG CCGGAGACGG TGAGGAAGCG TTACCTGCGG GCGGGTAACC AGTATTTCCT GAAGGACGCG CCGCATCAGC TCGCGTTCGA GGATATCGGC CCTTATCTGG TCACCGAGCA CAACCGTCCT GACGTGGTCG AGTCGATGGT GGACATGGTC CGTGCGAAGG CATGGGGGCG TATCCGCGTG GCGGGTCATG AGCAGTTCCG GCGCGAGGTC TGGGTCCAGG CCACGCTGCT CGGCATTGAA GTGAGCGGAT ATGAGCCGAA GGCCGTTGAC TTTGCGCGTC TGGCAGAAGG GCGTCGCGAA CGCATGACCA ACCGGATCGA CGTGACAGAA ACGTCGGCCG CGACGCAGGT ACCTGCGGGT TCCACGAAAA CGCAGGAGGT CAAGCCAGGT GTGTCTGCCA GCCCGAACGG GCAGCCTGTG AAACAGCCGC TGAAACCTGA CGCCAACCCC CAACCTGCGG CAGGGGCAAA GATCCCCCCT GCGCCGGGCG AGCTGCCGCA GACTGCGTCG TCGCGTGATG CCGCGTCGCG CGAAGCCGAA CCCGAGGGTC AGGAACGGCA GCGCTACGTG GGTGAGCTCG TCGAGCACGG TGGGGCACCC TACCAGCACA ACCCCGCACG CAGCGACTCG TACTACGTCG TTTATCGCGA TGCGGCTGGT GCGGACCATG TCGTCTGGGG CGTGGATCTG GAACGGGCCA TTTCGGAGGC GGGCGCCATC ACGGGAGAAC GGGTGACACT GGAAAATCTC GGCAGGCGCT GGGTTACCGT GAACGTCCCC GTGCTGGATG CGACGGGTAA GGTGATTGGC GAGGAAGAGA AGGAGGTCTA CCGCAACACG TGGCAGGTGG ATGTCACCGG TCGGGTGCGG ACGCAGTCGC AGGTCGACGT GCCTGATATG CCCGATACGC CCGAAAGCAA GGCTGAAACC GACAAACCGA TGCCTTCCCG TCATGCCGCG GCCGCAGACA GACACGACCG TTCGACAGCG TCGCCGGAGG AGCGAGCGGT GCAACTGGCG GTACTGACCA CGGCGATGCG GCAGCAGGGC TTCAGTGAAC GATCCATTTC ACGGGTGCAG CAACGGGCGC AACGGCTGCT GGACGCATTC GAGGCCGAGG GCGTCGAGGT CCCGCGGCCG CGCGTGTTTG ATCCGGAGGC GCCTTCCGCA CGCAGCCGCC GGCCGCGCGC AACCCAGGAG CGCGCCACGG CTCGCGAGAT GGAGCGCACA CCGTCCGAGC CTGCGCCGCC AGGTCTGTAG
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Protein sequence | MMDDTAISSG PPADEPVINV IEPDPPPLPD PQGGAGGAER FDQMAADALA ARRRREFDAA RSRLRDRAIQ ADAPSQDAAQ HPAPQWATQP RAPRGSGDAP SVQWVPLGNP PETVRKRYLR AGNQYFLKDA PHQLAFEDIG PYLVTEHNRP DVVESMVDMV RAKAWGRIRV AGHEQFRREV WVQATLLGIE VSGYEPKAVD FARLAEGRRE RMTNRIDVTE TSAATQVPAG STKTQEVKPG VSASPNGQPV KQPLKPDANP QPAAGAKIPP APGELPQTAS SRDAASREAE PEGQERQRYV GELVEHGGAP YQHNPARSDS YYVVYRDAAG ADHVVWGVDL ERAISEAGAI TGERVTLENL GRRWVTVNVP VLDATGKVIG EEEKEVYRNT WQVDVTGRVR TQSQVDVPDM PDTPESKAET DKPMPSRHAA AADRHDRSTA SPEERAVQLA VLTTAMRQQG FSERSISRVQ QRAQRLLDAF EAEGVEVPRP RVFDPEAPSA RSRRPRATQE RATAREMERT PSEPAPPGL
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