Gene Bphyt_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0174 
Symbol 
ID6281769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp188413 
End bp190002 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content67% 
IMG OID642619748 
Productputative DNA primase, DNA transfer TraO-like protein 
Protein accessionYP_001893837 
Protein GI187922195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.85378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0914571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATG ACACCGCAAT TTCTTCCGGG CCGCCTGCGG ACGAACCGGT CATCAACGTG 
ATCGAGCCGG ACCCGCCCCC ACTGCCGGAT CCGCAGGGCG GCGCCGGGGG CGCGGAGCGC
TTCGATCAGA TGGCAGCCGA TGCACTGGCC GCACGCCGAC GCCGTGAGTT CGATGCGGCG
CGCTCGCGGC TGCGCGATCG GGCCATCCAG GCGGATGCTC CGTCGCAGGA TGCCGCACAG
CATCCGGCAC CGCAGTGGGC AACGCAGCCA AGGGCACCAC GTGGCAGCGG CGACGCACCT
TCCGTGCAGT GGGTGCCGCT TGGCAATCCG CCGGAGACGG TGAGGAAGCG TTACCTGCGG
GCGGGTAACC AGTATTTCCT GAAGGACGCG CCGCATCAGC TCGCGTTCGA GGATATCGGC
CCTTATCTGG TCACCGAGCA CAACCGTCCT GACGTGGTCG AGTCGATGGT GGACATGGTC
CGTGCGAAGG CATGGGGGCG TATCCGCGTG GCGGGTCATG AGCAGTTCCG GCGCGAGGTC
TGGGTCCAGG CCACGCTGCT CGGCATTGAA GTGAGCGGAT ATGAGCCGAA GGCCGTTGAC
TTTGCGCGTC TGGCAGAAGG GCGTCGCGAA CGCATGACCA ACCGGATCGA CGTGACAGAA
ACGTCGGCCG CGACGCAGGT ACCTGCGGGT TCCACGAAAA CGCAGGAGGT CAAGCCAGGT
GTGTCTGCCA GCCCGAACGG GCAGCCTGTG AAACAGCCGC TGAAACCTGA CGCCAACCCC
CAACCTGCGG CAGGGGCAAA GATCCCCCCT GCGCCGGGCG AGCTGCCGCA GACTGCGTCG
TCGCGTGATG CCGCGTCGCG CGAAGCCGAA CCCGAGGGTC AGGAACGGCA GCGCTACGTG
GGTGAGCTCG TCGAGCACGG TGGGGCACCC TACCAGCACA ACCCCGCACG CAGCGACTCG
TACTACGTCG TTTATCGCGA TGCGGCTGGT GCGGACCATG TCGTCTGGGG CGTGGATCTG
GAACGGGCCA TTTCGGAGGC GGGCGCCATC ACGGGAGAAC GGGTGACACT GGAAAATCTC
GGCAGGCGCT GGGTTACCGT GAACGTCCCC GTGCTGGATG CGACGGGTAA GGTGATTGGC
GAGGAAGAGA AGGAGGTCTA CCGCAACACG TGGCAGGTGG ATGTCACCGG TCGGGTGCGG
ACGCAGTCGC AGGTCGACGT GCCTGATATG CCCGATACGC CCGAAAGCAA GGCTGAAACC
GACAAACCGA TGCCTTCCCG TCATGCCGCG GCCGCAGACA GACACGACCG TTCGACAGCG
TCGCCGGAGG AGCGAGCGGT GCAACTGGCG GTACTGACCA CGGCGATGCG GCAGCAGGGC
TTCAGTGAAC GATCCATTTC ACGGGTGCAG CAACGGGCGC AACGGCTGCT GGACGCATTC
GAGGCCGAGG GCGTCGAGGT CCCGCGGCCG CGCGTGTTTG ATCCGGAGGC GCCTTCCGCA
CGCAGCCGCC GGCCGCGCGC AACCCAGGAG CGCGCCACGG CTCGCGAGAT GGAGCGCACA
CCGTCCGAGC CTGCGCCGCC AGGTCTGTAG
 
Protein sequence
MMDDTAISSG PPADEPVINV IEPDPPPLPD PQGGAGGAER FDQMAADALA ARRRREFDAA 
RSRLRDRAIQ ADAPSQDAAQ HPAPQWATQP RAPRGSGDAP SVQWVPLGNP PETVRKRYLR
AGNQYFLKDA PHQLAFEDIG PYLVTEHNRP DVVESMVDMV RAKAWGRIRV AGHEQFRREV
WVQATLLGIE VSGYEPKAVD FARLAEGRRE RMTNRIDVTE TSAATQVPAG STKTQEVKPG
VSASPNGQPV KQPLKPDANP QPAAGAKIPP APGELPQTAS SRDAASREAE PEGQERQRYV
GELVEHGGAP YQHNPARSDS YYVVYRDAAG ADHVVWGVDL ERAISEAGAI TGERVTLENL
GRRWVTVNVP VLDATGKVIG EEEKEVYRNT WQVDVTGRVR TQSQVDVPDM PDTPESKAET
DKPMPSRHAA AADRHDRSTA SPEERAVQLA VLTTAMRQQG FSERSISRVQ QRAQRLLDAF
EAEGVEVPRP RVFDPEAPSA RSRRPRATQE RATAREMERT PSEPAPPGL