Gene Bphyt_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0145 
Symbol 
ID6281891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp162367 
End bp162726 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content57% 
IMG OID642619719 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001893808 
Protein GI187922166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000427165 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCTA AGCACGCGAC ATCCTCCGTT TTTGCCAAAC GCCTGAAAGA GGCGCGGGTA 
CGCTCGTGCC TTACCCAGGA ACAACTCGGC ATTAACGCAG GAATCGACGA ATTCTCTGCC
AGTGCCCGCA TCAACCAGTA CGAAAGAGGC AAACACTTGC CCCATCTCGG GATGGGGCAA
CGTCTGGCGA GGGCACTGCA TGTCCCCACC TCTTTTCTCT ACGAAGAGGA CGATCTGCTT
GCAGCTCTTC TCGTCGCTGC AGCCCGGCTC ACCCGGAGCA GGAAGAAGGT CCTCCTCGCG
AATGCGGAGA CGCTATCCCA ATCAGCAACA TCCAGGATCA AGAAACCAGG TAATGTTTAG
 
Protein sequence
MPAKHATSSV FAKRLKEARV RSCLTQEQLG INAGIDEFSA SARINQYERG KHLPHLGMGQ 
RLARALHVPT SFLYEEDDLL AALLVAAARL TRSRKKVLLA NAETLSQSAT SRIKKPGNV