| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0099 |
|---|
| Symbol | |
|---|
| ID | 6280819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 112705 |
|---|
| End bp | 114141 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642619677 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_001893766 |
|---|
| Protein GI | 187922124 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC TTCACGATTT ACCCCTGCGG GATCGTTGGG CGCGCCTGCG CTTTGCGGTT
GTGGGCCCCT TGCTGGCAGC ACCGCCTGAA CCCGGGCAGG TGCGCGAACT CATCACCGCG
CTGGCCGCCA AACGCTGGCG TCATCCCGTC ACTGGCGACG ATGTCCAGTT CGGCCGCTCC
ACCGTTGAGC GGTGGTTCTA CCGGGCCCGC AAGGCGGCCC ACGATCCGGT GGCGAGCCTG
CGCGACCGCA AGCGCCCCAG CGGCGCCGGC GCAAGCCTGT CGCCTCAGGC GGTACAGGCG
ATTCGCGCGC AGTACCGGGA ACATCCCGGC TGGACCTGCC AGTTGCACGT CGACAATCTC
AAGGTCACGC TCGGCCCGGC GAACCTGCCG TCGTACACGA CGGTGCGTCG TTATCTGCGT
GCGCAGGGCC TGTCCCGTGA ACGCAAGCCG CGTCATACCA GCGCCGGCGC GATGCTCGCA
CGCGATCGCC TCGAGAAGCT CGAGGTCCGC AGCTTCGAGG TCGAGCACGT CAACGCGCTC
TGGCATCTCG ATTTCCATCA CGGCTCGCGC AAGCTGCTCA CGCATGATGG CCAGTGGATC
ACGCCGATGC TGCTGTGCGT GCTCGATGAC CGTTCGCGCG TCGTCTGTCA CGCGCAATGG
TTTCTCGATG AGACCGCACG TAGTCTGATC CATGGGCTCA CCCAGGCGCT CCAGCGTCGT
GGCCGGCCTC GCGCACTGAT GACCGACAAC GGCGCAGCAA TGCTTGCCGA GGAGACGACC
GCCGGCTTGC TCGCGCTCGG CGTGCTGCAC CAGACGACCT TGCCATATTC GCCGTACCAG
AACGCGAAGC AGGAAACGTT CTGGGCCCGC ATCGAAGGGC GCGTGATGGC CATGCTCGAA
GGCGAGCCCA ATCTCACGCT CGAACTGCTC AATCAGGCCA CCCACGCGTG GATCGAGCGC
GAGTACCACC ACGCGCATCA TTCTGAGATC GGTGGCACGC CGCTCAAACG CTATCTGGCC
GGCCCCGATG TGGGCCGCGA ATGCCCGTCG AGTGACGCGC TGCGCGCCGC ATTCCGTATC
GACGTGACGC GCGCCCAGCG GCGCTCGGAT GGCACCGTGA GTCTGGCCGG CACGCGCTTC
GAGATTCCCT CGGCCTACCG GCACCTGCAG CGCGTGCACC TGCGCTATGC GCGCTGGGAC
CTGAGCGGCG TCGATCTCGT CGACGCCGGC AGCGGCGCCG TGCTGTGCCC GCTGCGGCCG
CTGGACAAGG CCGCCAATGC TGATGGCCAG CGCAGGCGAC TCGATGCCGT CAATGTCGAG
CCGCCACCGG CCAGTGCGCC CGGCATCGCG CCGCTGCTAC GCCAGATGCT GGCCGACCAC
GCCGCAACCG GGTTGCCGCC AGCCTGGATT CCCGCCAACT GGCAGGAGGA GGCATGA
|
|---|
| Protein sequence | MTELHDLPLR DRWARLRFAV VGPLLAAPPE PGQVRELITA LAAKRWRHPV TGDDVQFGRS
TVERWFYRAR KAAHDPVASL RDRKRPSGAG ASLSPQAVQA IRAQYREHPG WTCQLHVDNL
KVTLGPANLP SYTTVRRYLR AQGLSRERKP RHTSAGAMLA RDRLEKLEVR SFEVEHVNAL
WHLDFHHGSR KLLTHDGQWI TPMLLCVLDD RSRVVCHAQW FLDETARSLI HGLTQALQRR
GRPRALMTDN GAAMLAEETT AGLLALGVLH QTTLPYSPYQ NAKQETFWAR IEGRVMAMLE
GEPNLTLELL NQATHAWIER EYHHAHHSEI GGTPLKRYLA GPDVGRECPS SDALRAAFRI
DVTRAQRRSD GTVSLAGTRF EIPSAYRHLQ RVHLRYARWD LSGVDLVDAG SGAVLCPLRP
LDKAANADGQ RRRLDAVNVE PPPASAPGIA PLLRQMLADH AATGLPPAWI PANWQEEA
|
|---|
| |