| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0098 |
|---|
| Symbol | |
|---|
| ID | 6280818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 111851 |
|---|
| End bp | 112708 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642619676 |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_001893765 |
|---|
| Protein GI | 187922123 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGC GTCTGCAAGC CCTCTACGGC CTGAAGTGGA ACCCGTTCTC GCCGGAGCTT
CCCCTCGAAG CGCTGTACGT GCCGCCGCGC GTCGAGAACT TCTGCTGGCG CATCGAGAAC
GCGCTCGTGC GCGAAGGCGG CTTCGCGATG ATCCACGGCG AGCCGGGGAC CGGCAAGAGC
GTGGTCATGC GCGTGCTGGC CGAGAAGCTC GAGCGACTGA CCGATCTGAC AGTCGTCTCG
ATCAATCATC CGCAGAGCAA CCTTGCCGAC TTCTATCGCG AGATGGGCGA CATCTTCGGT
CTGGAACTCC GGCCGCACAA CCGCTGGGGC GGCTTCAGGT CGCTGCGCGA CCGGTGGATG
TCGCACCTGC AAAGCACGCG CCGGCGCCCA ATCCTGCTGA TCGACGAAGC GCAGGAAATG
AGTCCCGGCG TGCTCAACGA ACTGCGGCTC ATGGCCAGCG CCCGCTTCGA TTCGCAGCCC
CTGCTGTGCG TGGTGCTCGC CGGCGACACG CGCCTGACCG ACAAGCTGCG GCGCGACGAA
CTGCTGCCAC TGGGCAGCCG TATCCGTTCC CGCCTGGGGA CCGAGAAGGC TTCGGCCGAC
GACCTGCTGG CCTGCCTCGA ACATCTGCTC GCCAGCGCCG GCGCCCCGCA GCTGATGACA
CCGCCGCTGC GCCACACGCT GTGCGAACAC GCGCTGGGCA ACTACCGCGT GCTCACCACG
CTCGCCAACG AACTGCTCAC CACCGCCGCG CAGCGGGAAC TGTCCGAACT CGACGAGAAG
CTGTACTTCG AGGTCTTTGC ACCATCAACA CAGTCCTCGC GCCGCACGCC AGCGCGTCAA
CCCAACGGAG CCCGATGA
|
|---|
| Protein sequence | MSQRLQALYG LKWNPFSPEL PLEALYVPPR VENFCWRIEN ALVREGGFAM IHGEPGTGKS
VVMRVLAEKL ERLTDLTVVS INHPQSNLAD FYREMGDIFG LELRPHNRWG GFRSLRDRWM
SHLQSTRRRP ILLIDEAQEM SPGVLNELRL MASARFDSQP LLCVVLAGDT RLTDKLRRDE
LLPLGSRIRS RLGTEKASAD DLLACLEHLL ASAGAPQLMT PPLRHTLCEH ALGNYRVLTT
LANELLTTAA QRELSELDEK LYFEVFAPST QSSRRTPARQ PNGAR
|
|---|
| |