Gene Bphyt_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0087 
Symbol 
ID6284098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp106307 
End bp106684 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content62% 
IMG OID642619670 
Productprotein of unknown function DUF336 
Protein accessionYP_001893759 
Protein GI187922117 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCAGC CGTGGCTATT CGGTTACGGC GACCGTCTCG ATCCTTCGGG CCACCAGCAA 
GCGGTCATCA AGGGCGATTC GGTGCCGCTG CAATCGCTTT CCGTGTCCTA TCGCAAGGCC
TATACGGCTT ATGCCTATGG CCTGGCTTTC AACAAGGACT CCACCAGTGA GCTGATCGCG
GCGAAGGTAG CCGGCCCGCT CGACGGCGGC GTGCTGGCAA CGGAACCAGA AGTGATCTTC
ATCCCCGGCG GCGTGACCCT ACGTACGGCT GATCGCACCG TGATTGGCGG TATCGGCGTG
TCTGGTGCCC CGGGGGGCGA CAAGGACGAA GCGTGCGCGC AGGCGGCAGT GGATAAATAC
AGGCAGGATT TCCATTGA
 
Protein sequence
MRQPWLFGYG DRLDPSGHQQ AVIKGDSVPL QSLSVSYRKA YTAYAYGLAF NKDSTSELIA 
AKVAGPLDGG VLATEPEVIF IPGGVTLRTA DRTVIGGIGV SGAPGGDKDE ACAQAAVDKY
RQDFH