Gene Bphyt_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0079 
Symbol 
ID6282049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp97764 
End bp98918 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content61% 
IMG OID642619664 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001893753 
Protein GI187922111 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATG TTTGCCTCTT TCCGGAACCC AATATGCCGA CTTCGCTATC CGGTCTGTTC 
CGCACCACGC TCGCCGGACC CGAGTCACGC CTCACGGAGG CATTTGACAA TCTGCGTACC
CGGCTCGACT GCGTCAGCGT GCCCGAGTTC GGACTATATG GGGCCTCGGT GCCGGTTCCG
GGCGACGCGG AAGAGGGCGT GTGGCGTATG GCCAGCATTC GCGACGAGAT CTTTCTGGTG
ATTTCCGACT GCAACTACGC GCACAGCCGC TCCGAGAGTG TTTTGCCGGA GTCGTTCGTG
GAATTTCACT TTTCACTATC CGGCCCGGCA AGCGTCGATT TTTCTGATAC CGGTACGCTG
CAGGTGAATG CCCCCAACCT GCTCGTATGC CGGCAGGGTG CAGACGTGCG CTACACGGTC
ACCTGTGGGC CAGGCCCATG GCAATCGGTC GGACTCTACG TGACGCAGCG TTATTTCGAC
CGGTTGCTGG GTGCGGTTGG CAACGAGGCT GACCGCATTC GCGGCGAGCT CGCAGGGGTC
GGATTTGACC AGATTTACAA CCGGCAGATG CCGTTTAGCG TAGACGCCCT GAACATCGTC
GAGCAACTGC TGGATTCCCG CTATCGCGGT GCGCGTCAGA TGCTCTATCT GGAAGGCAAG
TGTACGGAGA TACTGTGCGC ATGCATCGAG ATGTGGCTCG CGCACGCGCG CGCCGACAAC
CCCGGCGAGA CGCTATCAGC GCGCGACCTG CGGCTGATTG AGCAGGCGCG GGAGATGATC
GTCGGCGACC TGCGTCTTGC GCCCACGATT CCCGAACTGG CGCGCGCGGT AGGGACCAAT
GCTTCGAAGC TCAAGCGTGG ATTCAAGTTC CTCTATGGGA TGACGATTTT CGAGTATGGT
CATCGCTGCC GGATGGATCG TGCGCTTCGG CTTCTGGTAG GCGAACGGCA GCCGGTGGGA
CAGGTGGCAT TGGCGGTCGG CTATCAGCAT CAGACCAGCT TTACCGCGGC TTTCCGTGAC
TACTTTGGCT TCGCACCAAA GGACGCCCGC CGCCTGGCGA GTCCCGTCGT ATCGGGGCCA
TCCCGCGTGG TTCAGCATGC CGACGAGCGA TCTGCGATCG ATGCTGCCAA GTCTGCGCCG
TCGGATCAGA CATGA
 
Protein sequence
MLDVCLFPEP NMPTSLSGLF RTTLAGPESR LTEAFDNLRT RLDCVSVPEF GLYGASVPVP 
GDAEEGVWRM ASIRDEIFLV ISDCNYAHSR SESVLPESFV EFHFSLSGPA SVDFSDTGTL
QVNAPNLLVC RQGADVRYTV TCGPGPWQSV GLYVTQRYFD RLLGAVGNEA DRIRGELAGV
GFDQIYNRQM PFSVDALNIV EQLLDSRYRG ARQMLYLEGK CTEILCACIE MWLAHARADN
PGETLSARDL RLIEQAREMI VGDLRLAPTI PELARAVGTN ASKLKRGFKF LYGMTIFEYG
HRCRMDRALR LLVGERQPVG QVALAVGYQH QTSFTAAFRD YFGFAPKDAR RLASPVVSGP
SRVVQHADER SAIDAAKSAP SDQT