| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0054 |
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| Symbol | |
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| ID | 6283428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 67674 |
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| End bp | 69488 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642619639 |
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| Product | ABC transporter related |
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| Protein accession | YP_001893728 |
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| Protein GI | 187922086 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGAGA CTCTCGCGCA GGTTCGCCGC ACCTTGCGGC CGGTGGCGAT CATCGTGCTG
GTGGGCGCGT TGCTCGTTGG ATTCGGGCCC GTCGTGCTCG ATTCCTATTC GGTCAACGTT
CTGACCCGCT CCCTGCTGTA TGCGGCGGTC GCCCTGACGG TCGATCTGCT GTGGGGGTAT
ATGGGGATTC TGACCTTCGG GCAGTCCGCA TTTTTCGCCA TCGGCGCCTA TACCTCGGGA
TTGATATTTA CCCACATCGG TTTCAGCCCG TGGCTGGCGC TCGCGGCGCT TGTTCTGGGC
GTGCTGGCGG CCATGGCGGT CGCCGCGCTG GTCGGCTGGC TGGCGTTCTG GCACGGTGCG
ACGAATCTCT ATGCCTCGGT CATTACGCTG GTGCTTTGCA TCGTCTGTAC CCAGGTGATT
TTTTCGGGTG GAAATTTCAC CGGATCGAGC AGCGGCCTGA CCGGTTTCGA CAGCTTCGAT
CTGTCCATGC AGGCATGGTT CTGGATCGCC GGTGGCTTTC TGATCGTAGT GACGGCTGGC
GCGTGGCTGC TGGTTCACAG CGACGCAGGA CGGATCCTGA TCGCCATTCG CGAAAACGAA
CAGCGTTGCG AATACCTCGG GCTGAACACT GCGCTGCTCA AGACCACCGC ATTTCTTGGC
TGCTCCGCCG TCGGTGCCGT TGCGGGCTAT CTGTACGCCA ATTATTCGAT GCTGGTCTCG
CCGGAACTGG CCGGTTTCGT ATTCGGCACC GAGCTCGTGA TCTGGACCGC GTTGGGCGGC
AGGGCAACGC TGCTCGGTCC GATTTTCGGC ACGATGCTGG TCGACTACGA AAGCGCGCAG
CTCAGCGGTG ATTTTCCTTA TGTATGGAAA CTTCTCATCG GCAGCATTTT CGTCATTGTC
ATCATCGCTT TTCCGCGCGG GCTGCTGCCC ATCGTGCCAG CGGCGCTGCG CCGCTTGTTC
GGGCGCGTGC GCCCCACGCA GGCGGCGCGT CGTGCGTTCG TGCCCGAGCT GGCGCTCGCC
AGCGGGACGG CGCATCGGCA GGATGCCGGG GACGGCGTGC CGCCTGCGCT CCAGGTCGTC
GACGTGCACA AGAATTTCGG TAGCCTCGCG GTATTGAGCG GCATAGACTT CGCCGCTCGT
GCCGGAGAAA TCGTCAGTCT GGTCGGGCCT AACGGCGCCG GCAAGACCAC GCTCATGCGC
TGCATCGCGG ACGGCATGGA GCGCAGCTCA GGCGATGTCG TGGTCAACGG CCGCAGCATC
GGCAAGTCGC CGCCAGCGCG CTGCGTCGCC ATGGGCGTCG GGCGCAAATT CCAGATGGCC
AACGTGTTCG ACACCCTGAC GGTGGCCGAA TGCCTCGGCA TCGCCCGGTT CGTCCATGAT
CGCCCCTCGC TGTGGCGGCG TAGAACGGCG CTGCAATTGC CCGAGGCCGC GTTTCACGTG
GTCCAGGCCA CCGGGTTGGC CGAGCGGCTG GGCGAGGAAG CTCGCCTGCT GTCCCACGGC
CTGAAGCAGG CACTCGAGCT GGCCATGGTA TTGGCGCTCG AACCACGCGT GGTCCTGCTG
GACGAACCGA CGGCGGGGCT CACCAAGACC GAACGCACGC AGATTGGCCG CATACTCGTG
GACATCGTGC GCGAACAGGG TATCTGCGTC CTGCTGGTTG AACACGATCT GAACTTCGTT
CGGGAAATCA GTTCGCGCGT CATCGTCCTG CATCAGGGAA AAATCCTGCT CGACGGATCG
GTCGACGAAG TCGTCTCGTC CGAATTGGTG AGCAGCGTCT ATACCGGCGG CGAGAATCTG
GAGCATGCGG CATGA
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| Protein sequence | MSETLAQVRR TLRPVAIIVL VGALLVGFGP VVLDSYSVNV LTRSLLYAAV ALTVDLLWGY
MGILTFGQSA FFAIGAYTSG LIFTHIGFSP WLALAALVLG VLAAMAVAAL VGWLAFWHGA
TNLYASVITL VLCIVCTQVI FSGGNFTGSS SGLTGFDSFD LSMQAWFWIA GGFLIVVTAG
AWLLVHSDAG RILIAIRENE QRCEYLGLNT ALLKTTAFLG CSAVGAVAGY LYANYSMLVS
PELAGFVFGT ELVIWTALGG RATLLGPIFG TMLVDYESAQ LSGDFPYVWK LLIGSIFVIV
IIAFPRGLLP IVPAALRRLF GRVRPTQAAR RAFVPELALA SGTAHRQDAG DGVPPALQVV
DVHKNFGSLA VLSGIDFAAR AGEIVSLVGP NGAGKTTLMR CIADGMERSS GDVVVNGRSI
GKSPPARCVA MGVGRKFQMA NVFDTLTVAE CLGIARFVHD RPSLWRRRTA LQLPEAAFHV
VQATGLAERL GEEARLLSHG LKQALELAMV LALEPRVVLL DEPTAGLTKT ERTQIGRILV
DIVREQGICV LLVEHDLNFV REISSRVIVL HQGKILLDGS VDEVVSSELV SSVYTGGENL
EHAA
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