| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7349 |
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| Symbol | |
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| ID | 6280694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010679 |
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| Strand | + |
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| Start bp | 77470 |
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| End bp | 78468 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642619528 |
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| Product | TrbL/VirB6 plasmid conjugal transfer protein |
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| Protein accession | YP_001893563 |
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| Protein GI | 187921974 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.149767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCGA CGGGCACCTT CACCGACCTC TTTGCAAACG TCAACGCCGC GTTGCAGGCG
ACGTTCACGT CAGCATCGAC CGGTATGTCC AATTACGTCA TCCCGCTCGG ATGGGCGATG
TTTGGCGTTT CAATTCTCGT CTGGTCGTTC ATGGTGATGA CGGGGCGTGT CGCGTCACCG
GCCAACGAGT GGATGATGAA GGGCGCGGCA ATTCTGCTGA TTCTGTCGGC AGCCGGGGCG
AACTATTCGA CGTGGGTTTC GGGGCCGCTT TTCCAGCTCC CCAACGACCT TGCAAACGCG
ATTGGTAGTA GCGGCACGCC TGCCCAGGTG CTCGATATGC TGGAAACGCA GCTTAACCAG
ATGCTCGACG GCATCGCGTC CGCTGTCGTT AGCAGTTTCT CCAATCTGAA TTTCGGCGGC
GGCATCATCC TTTTCGCTGC GCTGGTGATC GTCAGCATCG CATGCGCGTT GCTTCTTATC
GGCGCGGCGT TCAACGTGCT CTATGCGCAA ATCGGACTCT CGCTCGTTCT GTCTGTCGGC
CCGTTTTTCA TTATCTGGAT GATCTGGAAG CAGACCCAGC ATTGGGCTTG GAGCTGGCTC
AACACGGCGC TCTACTACGT GTTTCTCACG GTCCTGTCTG CAATGTTCAT CCTGCTTTTC
ATCCAGATAT GCACTCATTA CATGAGCAGC CTGGAAAGCG CCGTCACAGC TCTTGGTCCG
ACCGTTCCGT CCGATTCTTC GTTTGCCTCC AAGCTCGCTT CACTGCTTGA GAAGCAAGTC
AATCCGCAGG CACAGATCGC GGTGGCAACG TCGTATCTCA ATATTTTCTC GATTTCTTTG
CAGCTCGCAT TTATCTGCCT GCCGATGTTC TTCATCGAAA TCCAGTTGCC TACCATCGCC
GCGAGCATGA CGGGCGGACA GGGGGGCAGC GTCGGGTCCG GCTTCTACAT GGTTATGCAG
GCCGCCCGGA CGGCCGCTGC GTTCAAGGGC GGCAAGTAA
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| Protein sequence | MDSTGTFTDL FANVNAALQA TFTSASTGMS NYVIPLGWAM FGVSILVWSF MVMTGRVASP
ANEWMMKGAA ILLILSAAGA NYSTWVSGPL FQLPNDLANA IGSSGTPAQV LDMLETQLNQ
MLDGIASAVV SSFSNLNFGG GIILFAALVI VSIACALLLI GAAFNVLYAQ IGLSLVLSVG
PFFIIWMIWK QTQHWAWSWL NTALYYVFLT VLSAMFILLF IQICTHYMSS LESAVTALGP
TVPSDSSFAS KLASLLEKQV NPQAQIAVAT SYLNIFSISL QLAFICLPMF FIEIQLPTIA
ASMTGGQGGS VGSGFYMVMQ AARTAAAFKG GK
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