Gene Rpic_4945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4945 
Symbol 
ID6285260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1299881 
End bp1300645 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content66% 
IMG OID642619419 
Productmalonate transporter, MadM subunit 
Protein accessionYP_001893454 
Protein GI187927109 
COG category 
COG ID 
TIGRFAM ID[TIGR00808] malonate transporter, MadM subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0533752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCAA TGCTAGAGAA AGTTCTGCAG CACAACGGGC TGGTCGCGGC GTTCGCGCTG 
GTCGGCATCG TCATGGGCCT GTCGATGTGG GTGTCCAAGA AGCTGACGTT CGGGCGCGTG
CACGGCTCGG CCATCGCCAT CATGATCGGG CTGGTGCTCG CCTATTGGGG CGGCATGCAG
ACCGGTGGCG AACGCGGCCT GGCTGATCTG AAGCTGTTCG GCGGGATCGG CCTGATGGGC
GGGGCCATGC TGCGCGATTT CGCCATCGTT GCCACGGCCT TTGAAGTGCA GGTGACTGAG
GCACGCAAGG CCGGCATGAT CGGCGCCGTC TCGCTGTTGC TCGGCACGGT GCTGCCGTTC
ATCGTCGGCG CGTGTGTTGC CTATGCCTTC GGTTACACCG ATCCGGTGAG CGTCACCACC
ATCGGCGCAG GTGCCGTCAC GTACATCGTC GGGCCGGTGA CCGGTGCAGC GCTGGGCGCC
ACCTCCGATG TGATGGCGCT GTCGATTGCC ACGGGGCTCG TCAAGGCGAT CCTGGTGATG
GTCGGCACGC CATTCGCTGC CAAGGCGCTG GGCTTGAACA ACCCGCGCGC GGCCATGGTG
TTCGGCGGAT TGGCGGGTAC GGTCAGCGGG GTGTCGGCGG GTCTGGCGGC CACGGATCGG
CGCCTGGTGC CTTACGGCTC GCTGGTGGCC ACGTTCCATA CGGGTATCGG CTGCCTGCTC
GGGCCGTCGA TCCTGTTCCT GGCCACGCAG GCATTGCTGC GATGA
 
Protein sequence
MLSMLEKVLQ HNGLVAAFAL VGIVMGLSMW VSKKLTFGRV HGSAIAIMIG LVLAYWGGMQ 
TGGERGLADL KLFGGIGLMG GAMLRDFAIV ATAFEVQVTE ARKAGMIGAV SLLLGTVLPF
IVGACVAYAF GYTDPVSVTT IGAGAVTYIV GPVTGAALGA TSDVMALSIA TGLVKAILVM
VGTPFAAKAL GLNNPRAAMV FGGLAGTVSG VSAGLAATDR RLVPYGSLVA TFHTGIGCLL
GPSILFLATQ ALLR