Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4929 |
Symbol | |
ID | 6285844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 1279970 |
End bp | 1282096 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642619405 |
Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
Protein accession | YP_001893440 |
Protein GI | 187927095 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.504064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACA TCACCATCGA CACCGACGGC ATCGCCACGC TCACGTGGAA CCAGCCGGGC CGCGCGCAGA ACGTGCTCAA CGGCGACACC TGCGCCGCCT TTTTTGCCGC CATCGACCGC GTATGCGCCG ATGCCAGCGT CAAGGGCATT CTCGTCACCT CGGCCAAGGC GGATTTCATT GCCGGCGGCG ACCTCGAATG GCTGCAGGCC AGCGACGACG CAGCCACGTT GTTTGATCGC ACGTGCGAGC TGCACCGCAT GCTGCGCAAG CTGGAAACCT GCGGCAAACC CGTGGCCGCC GCGCTGCCGG GCTCCACGCT GGGCGGCGGG TTGGAGATTG CGCTCGCCTG CCACTACCGC GTGGCGGCCG ACAACGCCCG CGCGCGCTTT GGCCTGCCGG AAGTCACGCT GGGCCTCTTG CCGGGTGGCG GCGGCACGCA GCGTCTGCCG CGCTTGATTG GTGTGCAGAA GGCGCTGCCG ATGCTGCTGG AAGGCAAGCG CATCAAGGCG GCCGACGCGC TCAAGCTCGG CATTGTCGAT GCGGTCGTCA ATGCGGGCGA GGAAGCCGAT GCCGCGCGCA CGTGGCTGCT GGGCGACGGC CAGACCCGCG CGCAGCAGCC GTGGGACATC AAGGGCTACA AGGTGCCCGG GGGCGGCATC GCCAGCCCCG CCGTGCAGCA GCTATTCACG GCGGCCAACG CCATGCTGCG GCAGAAGACC TACGGCAACT ATCCGGCAGC GGCGAGCATC CTGTCGTGCG TGTACGAAGG GCTCATCACC GATCTCGATA CGGGCCTCAA GACCGAGGCG CGCTACTTCG TGCAGGCGGT GCTGTCTCCG GAAGCCCGCG CGATGATCCG TACCCTTTTC TTCAGCCTGA ACGCCGCCAA CAAGCTGGCC GCGCGCCCGG CCGATGTGCC GGTGCGGCGC TACGCCAAGG TGGGCGTGCT CGGTGCCGGC ATGATGGGTG CGGGCATTGC CTATGTCACC GCCAAGGCGG GGGTGCCCGT CGTGCTGCTC GACACCACGC AAGAAGCTGC CGAACGCGGT AAAGACTATT CACGCAAGCT CGTCGAGAAA CAGGTACAGC GCGGCCGCCT GCATGCCGAG CAGGCCGAAG CGCTGCTCGC CCGCATCAAA CCGACCACCT CATACGCGGA CCTCGACGGC GCGGGCCTCA TCGTCGAGGC CGTATTCGAG CAGCGCGAGA TCAAGGCCGA CGTCACGCGC ATGGCCGAAG CCGTGATCTC GCCGGACGCC ATCTTCGCGT CCAACACCTC CACGCTGCCG ATTACCGGGC TGGCGGAGGC GAGCCAGCGG CCGGGCAACT TCATCGGGCT GCATTTCTTC TCGCCGGTCG ACAAGATGCC GCTGGTGGAG GTGATCGTCG CCCGGCAGAC CACGCGGGCC ACGCTGGCGC AGGCGCTCGA TTACGTGAAG GCCATCGGCA TGACGCCCAT CGTCGTCAAT GACAGCCGAG GGTTCTATAC GAGCCGCGTG TTCTCGACCT ACGTGCTCGA AGGCCTGGCG ATGCTCGCCG AAGGCGTGGC ACCCGCATTG ATCGAGAATG CCGGGCTGCA GGCCGGCATG CCGGTCGGGC CGCTCGCGCT GATCGACGAA GTCTCGAGCG AGCTGATCCA CAAGGTCAAC CAGCAAACCC GCGCCGACCT GGGTGTCGCC TACATCGAGC GCCCCGGCGA AGCCGTGGCC GAGCGCATGG TGGCGCTGGG CCGCATCGGC CGCAAGGCAG GCCAGGGCTT CTACGACTAC CCCGAAGGCG GCAGGAAGGC GCTCTGGCCG GGCCTGGCCG CCGAGTATCC GCCGGCCGCC ACGCAACCTG ACGTGCAGAC CCTCGTCGAC CGGCTGATCA CGGTGCAGGC CGTTGAAACC GCACGCTGTC TCGACGAAGG CGTGGTCACC GACCCGCGCG ATGCCGATGT CGGTGCGCTG CTGGGTTGGG GATTCCCGGC TTTCCGCGGC GGCCCGGTCT CGCATATCCA GCGCGTGGGC GTCGACGCGT TTGTCGAGCA GTGCGATCGT CTGGCCGCCG ACCATGGCCG CCGCTTTGCG CCGCCCAAGC TGCTGCGGGA TATGGCGGAA CAGCACGCGG TGTTCTATAC GCGGTAG
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Protein sequence | MIDITIDTDG IATLTWNQPG RAQNVLNGDT CAAFFAAIDR VCADASVKGI LVTSAKADFI AGGDLEWLQA SDDAATLFDR TCELHRMLRK LETCGKPVAA ALPGSTLGGG LEIALACHYR VAADNARARF GLPEVTLGLL PGGGGTQRLP RLIGVQKALP MLLEGKRIKA ADALKLGIVD AVVNAGEEAD AARTWLLGDG QTRAQQPWDI KGYKVPGGGI ASPAVQQLFT AANAMLRQKT YGNYPAAASI LSCVYEGLIT DLDTGLKTEA RYFVQAVLSP EARAMIRTLF FSLNAANKLA ARPADVPVRR YAKVGVLGAG MMGAGIAYVT AKAGVPVVLL DTTQEAAERG KDYSRKLVEK QVQRGRLHAE QAEALLARIK PTTSYADLDG AGLIVEAVFE QREIKADVTR MAEAVISPDA IFASNTSTLP ITGLAEASQR PGNFIGLHFF SPVDKMPLVE VIVARQTTRA TLAQALDYVK AIGMTPIVVN DSRGFYTSRV FSTYVLEGLA MLAEGVAPAL IENAGLQAGM PVGPLALIDE VSSELIHKVN QQTRADLGVA YIERPGEAVA ERMVALGRIG RKAGQGFYDY PEGGRKALWP GLAAEYPPAA TQPDVQTLVD RLITVQAVET ARCLDEGVVT DPRDADVGAL LGWGFPAFRG GPVSHIQRVG VDAFVEQCDR LAADHGRRFA PPKLLRDMAE QHAVFYTR
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