| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4862 |
|---|
| Symbol | |
|---|
| ID | 6285706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 1209422 |
|---|
| End bp | 1210738 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642619338 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001893373 |
|---|
| Protein GI | 187927028 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.592748 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCCA TCCGCAAAAC CCTGCTGTGG TGGCTGGCCG GCGGTCTGCT GGCGGGCATC
GTCATTGCCA CCGGCCTGAT CTACGCGCAG GCCCGACAGG AGGCCAACGC GCTGTTCGAC
TACCAGATGC AGCAGATGGC CGCCGCCCTG CCCAGCCAGT GGATCGACCC GCCTCCCCCG
GCGCTGGCCG CCATTGCGCG CGACGACGAT GTCGTGATCC GCATCTGGGA CGACTCCGGC
CGCAGCCTGT ATCTCTCGCA CGCGCGTCCG GACCTGCCCG AGCGCGCCGA GCTGGGTTTC
TCCGACGTGC GCACGGCCGA GGGCCCTTGG CGCGTCTACA GCGTTGCCTT CGGACCTGCC
GTGGTGCAGA TCGCGCAGCC CTACAGCGCG CGTCACGAGG TGGCGGCGCG CATGGCCCTG
CGCACGGTGG CGCCGCTGCT GATCCTGCTG CCGCTGCTGG GGTGGATCGT GTGGCTGGCC
GTCGGGCGTG GGCTGGCGCC GCTGGGCTTG GTCGCCACGC AGGTCCAGGC ACGCGATGCG
GCGGCGCTGT CGCCGCTTCC CACGCAAGGC CTGCCGGATG AGATCCGTCC GCTCACCAGT
GCGTTGAACG ATCTGCTCGC CCGTCTCGGG ACTGCGCTGG CGCACCAGCG TGCGTTCGTC
GCCGATGCCG CGCATGCGCT GCGCACGCCG CTGGCCGCCC TCAAGCTGCA GCTGCAGGTG
GCCGACCGCG CGCAGAGCGA GGAAGAACGC CGGGCCGCGC ATGCCGACCT GCATCGCGGC
GTGGAGCGCA TGATCCGCCT GGTCGGCCAG TTGCTGACCC TGGCGCGGCA GGAGCCCGGC
GCCGCCGACC CGCAGCGCGC GCCGGTGGCA CTCGACGCCG TGGCGGCCGA TGTGGTCGCC
GAGCTGTCCC CGGCGGCCAT TCACAAGGGC ATCGATCTGG GTATCGATGT GGCGTCCCAG
CCGGCGTCCG TCCTGGGCAG TGCCGATGCG TTGCGCGTGC TGCTGGTCAA TCTTGTCGAC
AACGCGCTGT GCTACTGCCC CCGCGGCTCG CGCGTCGACG TGTCGACCAG CCACACGCCC
GACGGCGGTG TGCAGCTCGT CGTGGAAGAC GACGGCCCCG GCATTCCCGC AGAAGAGCGC
GAACGCGTGC TCGACCGCTT CTACCGACCC ACGCACGCGC CGACCGGCGG CAGCGGCCTC
GGCCTGGCCA TCGTCCGGGA AATTGCCCAG GCGCATGACG CGGCGCTGGC GCTGGAAACC
CGCGAGGGCG GCGGCTTGCG CGTGGTGTTG CGCTTTCCGT TCAAGGCCGA GACGTAG
|
|---|
| Protein sequence | MQSIRKTLLW WLAGGLLAGI VIATGLIYAQ ARQEANALFD YQMQQMAAAL PSQWIDPPPP
ALAAIARDDD VVIRIWDDSG RSLYLSHARP DLPERAELGF SDVRTAEGPW RVYSVAFGPA
VVQIAQPYSA RHEVAARMAL RTVAPLLILL PLLGWIVWLA VGRGLAPLGL VATQVQARDA
AALSPLPTQG LPDEIRPLTS ALNDLLARLG TALAHQRAFV ADAAHALRTP LAALKLQLQV
ADRAQSEEER RAAHADLHRG VERMIRLVGQ LLTLARQEPG AADPQRAPVA LDAVAADVVA
ELSPAAIHKG IDLGIDVASQ PASVLGSADA LRVLLVNLVD NALCYCPRGS RVDVSTSHTP
DGGVQLVVED DGPGIPAEER ERVLDRFYRP THAPTGGSGL GLAIVREIAQ AHDAALALET
REGGGLRVVL RFPFKAET
|
|---|
| |