Gene Rpic_4852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4852 
Symbol 
ID6285673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1197560 
End bp1198444 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID642619328 
Productputative oxidoreductase 
Protein accessionYP_001893363 
Protein GI187927018 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCA TCGTTCAGTC CGGCACGTTT TCCATCGGCG GCCACCGCGT GCAACGCCTC 
GGCTATGGCG CCATGCAGCT CGCGGGGCCC GGCGTCTTTG GCCCGCCCAA GGATCGCGAC
GCGGCACATG CCGTATTGCG TGAAGCCGTT GCCTCGGGCA TCAACCATAT CGACACGAGC
GACTTCTACG GCCCGCACAT CACGAATCAA TTGATCCGCG AAGCCTTGCA TCCCTATCGC
GACGATCTGC TCATCGTCAC CAAGATTGGC GCCGTGCGCG ACGACAACGG CGCCTGGCTG
CCGGCATTCT CCACGCAGGC GCTGACCGAC GCCGTGCACG ACAACCTGCG CAACCTCGGC
CTGGATGTCC TGGACGTGGT GAACTTGCGG ATCATGTTCG ACACGCACGG CCCGGCCGAA
GGGTCGATCG AGGCACCGAT GACAGCCTTG GCCGAACTGC AGCGGCAGGG GCTCGTGCGA
CACATCGGGC TGAGCAACGT CACGGCCAAC CAGATCGCGG AAGGACGGCG GATCTGCGAC
ATCGTCTGCG TGCAGAACCA CTACAACCTT GCCCACAGAA ACGACGACGG GCTGATCGAC
GCATTGGCCC GCGACGGCAT TGCGTACGTC CCGTTCTTTC CGCTGGGCGG GTTCAACCCG
CTGCAATCGT CCACGCTCAA CGCTGTGGCA GCACGGCTCG GCGCAACACC GATGCAGACC
GCACTCGCCT GGCTGCTGCA CCGGTCGCCC AACATTCTGG TGATCCCGGG CACCTCGTCG
GTTGCCCACC TGCGCGAGAA CCTGGGTGCG GCGGCCATGA CGTTGCCGGG CGATGCGATG
CGCGAACTCG ACGCGGTCGG GCTTTCCACG GACGAGGCCG CCTGA
 
Protein sequence
MSPIVQSGTF SIGGHRVQRL GYGAMQLAGP GVFGPPKDRD AAHAVLREAV ASGINHIDTS 
DFYGPHITNQ LIREALHPYR DDLLIVTKIG AVRDDNGAWL PAFSTQALTD AVHDNLRNLG
LDVLDVVNLR IMFDTHGPAE GSIEAPMTAL AELQRQGLVR HIGLSNVTAN QIAEGRRICD
IVCVQNHYNL AHRNDDGLID ALARDGIAYV PFFPLGGFNP LQSSTLNAVA ARLGATPMQT
ALAWLLHRSP NILVIPGTSS VAHLRENLGA AAMTLPGDAM RELDAVGLST DEAA