| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4842 |
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| Symbol | |
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| ID | 6285643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 1183459 |
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| End bp | 1185597 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642619318 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001893353 |
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| Protein GI | 187927008 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGA CCGTGGCGCT GGTGCTGCTG GGTGCCGTGC GCCCGGCCGC CGCCCTCCAG
GTGGATTTCC TGCCCAAGCC CGACCCGGAC GACGGCAAGA CCTTCCGCGT GCTGTGTTTC
CACGACATCC GAGACAACCT GCGCGCCAGC TTCGAGAAGC TGCCCGACGG GTTTGCCGCC
GATACCAAGA TGCTGACCAA CATGTTCAGC TGGCTGCAGG CCAATGGCTA CCACCCGGTC
ACGCTGGCGC AGATCGACGC GGCGCGCCAC GGCGGCAAGC CGCTGCCCAA GCGGCCCATC
CTGCTGACGT TCGACGACGG CTACGAAAGC CACTACACGA AGGTGTTCCC GCTGCTCAAG
CAATTCCGCT TTCCGGCGGT GTTCGGGCTG GTGACGGAGT GGACCAATGC GCCCCCGGGG
GCAAAGATCA AGCTGTCCCC CAAGCAGATC GTCGATCGCG ATTTCTTCAT GAACTGGAAT
CAGATCCGCG AGATGCAGGC TTCGGGCCTG GCGGAATTCG CAACGCACAC GCACGACATG
CACCACGGCG TGCTGGGTAA CCCGCAGGGC AATGAGCTGC CGGCCGCCGG TACGCACGAA
TACCTGGCCA AGCTCGGTCG CTACGAAACC GACGACGAAT ACCGCAAGCG CGTGCATGAC
GACTTGAAGC GCAGCATCGA CCTGATCGAG AAGAATATCG GCGCCAAGGT GCAGACGGTC
GTGTGGCCGT ACGGCGCGCA CAACCAGATG CTGGACCAGG AAGCCGCCAA TGTGGGCCTC
AAGTACATGC TGACGCTGGA GCCGGGCCCC AACACGCCCG ACGTGCCGCT CACGGCCATC
CGGCGCAGCC TCATGGGCTA CGACACCGAC ACGGGCGATC TGGAGCGCTC GCTGCGCGAG
CCCGTCACGC ACCACGGGGA AATCAACCCG GTCCAGCGCG TGGTGCAGGT CGACATGGAC
TACATCTACG ACCCGGACCC CAAGCAGCAG GAAGCCAACC TCGGCAAGCT GATCGACCGC
ATCAAGGACC TCGCGCCGCG CGTGGTCTAC CTGCAGGCCT TTGCCGATCC GAAAGGCGAT
GGCGCGGTGG ACGCCGTGTA CTTCCCGAAC CGCCACATGC CGATGCGCGC CGACCTGTTC
TCGCGGGTTG CGTGGCAGCT GAAGACGCGG GCCAAGGTGG AGGTCTATGC GTGGCTGCCG
ATGCTGTCGT TCAAGCTGCC TGCCAACAAC CCGGCGGCCA CGCACCTCGT GCAGACCTTG
CCGGGCGCGC CGCAGAAGCC GGGCACGGTC AAGCCTCCGC GCCTGTCGCC GTTCGATCCG
GAGGCGCGCA AGATGATCCG CGACATTTAT GAGGACCTGG CCAAGTACGC CATCATCGAC
GGGGTTCTCT TCCACGACGA CGGCGTGCTC GACGACTACG AGGACGCCAG CCCTGCCGCG
CTCAAGGCCT ACGAGGCCAT GGGCCTGCCC GGCGATATCA ACAAGATCCG CCAGTCGCCC
GAGCTGATGC AGAAGTGGAC ACGCGGCAAG ACCGCCGCGC TGATCTCGTT TTCGCACGAG
CTGATCTCGG TGGTGCAGGG CTACCAGAAC GGGCGTGACA TGCTGACCGC GCGCAACATC
TTCGCGAGTC CGGTGCTCGA TCCGAAGGCG GAGGCCTGGA CCGCCCAGAA CTTTGATGAC
TTCCTGAAGG CGTACGACTA TGTGGCGCTC GAAGCCATGC CGTACATGGA AGACGCCAAG
GATCCGAAGG AGTGGATGGC CAAGCTGACT GCTGCCGTGG CCAAGCACAA GGGCGGGCTG
AAGAAGACCA TCTTCGAGCT GCAGGCCGTG GACTGGCGCA ACAAGGACAA GCCGATCCCG
ACCGTGGAGC TGCGTGACCA GATGCGTCGC CTGCGCTCGG CCGGTGCGCT CAACTACGGC
TACTACCCGG ACGACTTCAT CGCCGGCCGG CCTGACACCG AAGTGCTGCG TGACGTGATG
TCGCTCAAGA CGTACATCGA GACGCGCAAG GCGCAGCCCA GCGCAGAAAA GCTCAACAGC
GGCACATCGC AACCCCAGGC ACCTGCAGCC GCGGCGGAAA AGAAGCCGCC GGTCACGGCC
GAAGCGGCAG CGTCTTCCAA CCACCAGGCC GGAGGCTGA
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| Protein sequence | MALTVALVLL GAVRPAAALQ VDFLPKPDPD DGKTFRVLCF HDIRDNLRAS FEKLPDGFAA
DTKMLTNMFS WLQANGYHPV TLAQIDAARH GGKPLPKRPI LLTFDDGYES HYTKVFPLLK
QFRFPAVFGL VTEWTNAPPG AKIKLSPKQI VDRDFFMNWN QIREMQASGL AEFATHTHDM
HHGVLGNPQG NELPAAGTHE YLAKLGRYET DDEYRKRVHD DLKRSIDLIE KNIGAKVQTV
VWPYGAHNQM LDQEAANVGL KYMLTLEPGP NTPDVPLTAI RRSLMGYDTD TGDLERSLRE
PVTHHGEINP VQRVVQVDMD YIYDPDPKQQ EANLGKLIDR IKDLAPRVVY LQAFADPKGD
GAVDAVYFPN RHMPMRADLF SRVAWQLKTR AKVEVYAWLP MLSFKLPANN PAATHLVQTL
PGAPQKPGTV KPPRLSPFDP EARKMIRDIY EDLAKYAIID GVLFHDDGVL DDYEDASPAA
LKAYEAMGLP GDINKIRQSP ELMQKWTRGK TAALISFSHE LISVVQGYQN GRDMLTARNI
FASPVLDPKA EAWTAQNFDD FLKAYDYVAL EAMPYMEDAK DPKEWMAKLT AAVAKHKGGL
KKTIFELQAV DWRNKDKPIP TVELRDQMRR LRSAGALNYG YYPDDFIAGR PDTEVLRDVM
SLKTYIETRK AQPSAEKLNS GTSQPQAPAA AAEKKPPVTA EAAASSNHQA GG
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