Gene Rpic_4818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4818 
Symbol 
ID6285532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1157304 
End bp1157843 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID642619294 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_001893329 
Protein GI187926984 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.683048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCC AACACGCGCT GCTCACATCC CTGCTTGAAA AGCCCTCGTC CGGCTACGAG 
CTTGCCCGCC GCTTTGACAA ATCGATGGGC TATTTCTGGA GCGCCACGCA TCAGCAGATC
TACCGCGAGC TTGGCCGCAT GGCAGAGGCC GGCTGGGTAA GCGCGGAAGA AGAGGAAGAC
AGCCGCAAGA AGACCTACAC CGTCTTGCCG CCCGGCCGGG ACGAGCTTGC GCGGTGGGTG
CTGGAGCCGA CGGTATCGTC GGACAACCGC GAAGAAGTGC TGGTGAAGCT GCGCGCCGAG
GCGGTGATCG GCCCGCTCGG TTTTGCCGAC GAGATGCAGC GTCTGATCAC GCAGCATCGC
ACGCGCCTGA ACACCTTCCG CGAGATCGAG CAACGCGATT TCTCCGGTGC GGATCTCACG
CGCGCGCAGC GGCTGCGGCA CGCGGTGCTT CAGCGCGGCA TCGTCTATGA AGAAGGCTGG
CTCGCGTGGG CAGGCGAAGT GCTGCCGTTG CTGGAGCCAG CCTCGGTAAC GACGGCCTGA
 
Protein sequence
MSIQHALLTS LLEKPSSGYE LARRFDKSMG YFWSATHQQI YRELGRMAEA GWVSAEEEED 
SRKKTYTVLP PGRDELARWV LEPTVSSDNR EEVLVKLRAE AVIGPLGFAD EMQRLITQHR
TRLNTFREIE QRDFSGADLT RAQRLRHAVL QRGIVYEEGW LAWAGEVLPL LEPASVTTA