Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4818 |
Symbol | |
ID | 6285532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 1157304 |
End bp | 1157843 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642619294 |
Product | transcriptional regulator, PadR-like family |
Protein accession | YP_001893329 |
Protein GI | 187926984 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.683048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATCC AACACGCGCT GCTCACATCC CTGCTTGAAA AGCCCTCGTC CGGCTACGAG CTTGCCCGCC GCTTTGACAA ATCGATGGGC TATTTCTGGA GCGCCACGCA TCAGCAGATC TACCGCGAGC TTGGCCGCAT GGCAGAGGCC GGCTGGGTAA GCGCGGAAGA AGAGGAAGAC AGCCGCAAGA AGACCTACAC CGTCTTGCCG CCCGGCCGGG ACGAGCTTGC GCGGTGGGTG CTGGAGCCGA CGGTATCGTC GGACAACCGC GAAGAAGTGC TGGTGAAGCT GCGCGCCGAG GCGGTGATCG GCCCGCTCGG TTTTGCCGAC GAGATGCAGC GTCTGATCAC GCAGCATCGC ACGCGCCTGA ACACCTTCCG CGAGATCGAG CAACGCGATT TCTCCGGTGC GGATCTCACG CGCGCGCAGC GGCTGCGGCA CGCGGTGCTT CAGCGCGGCA TCGTCTATGA AGAAGGCTGG CTCGCGTGGG CAGGCGAAGT GCTGCCGTTG CTGGAGCCAG CCTCGGTAAC GACGGCCTGA
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Protein sequence | MSIQHALLTS LLEKPSSGYE LARRFDKSMG YFWSATHQQI YRELGRMAEA GWVSAEEEED SRKKTYTVLP PGRDELARWV LEPTVSSDNR EEVLVKLRAE AVIGPLGFAD EMQRLITQHR TRLNTFREIE QRDFSGADLT RAQRLRHAVL QRGIVYEEGW LAWAGEVLPL LEPASVTTA
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