| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4765 |
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| Symbol | |
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| ID | 6285350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 1100420 |
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| End bp | 1102093 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642619241 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001893276 |
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| Protein GI | 187926931 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.652066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCCC TGCGTGCACA GCTGCATGAG GCGCGGCCCG ATGATGCCGT GGTTTGCCTC
GACGGTGCGG CAACGATGAC GTACGGGATG TTCCACGCTC GCGTGGCGGC CTACGCCGGA
GCCTTTACAA CGCAGGCAAC GACGCACTAC GCGCTGTGCA TCGAGGATCC GTTCGATTTC
GCCTGCGCGC TCTTTGCACT GTTTGCGAGC GGCAAGCACG TCGTGATTCC CGCCAGCGCG
GCTCCGGCGT ATCTGGAATC GCTGGGTACC GCCTTTGACG CGCTCGTGAC CGACGCCAGC
CTCCGCTCGA TCGATCAGCA CGCCGAAGCG GTCGTCGGGC CGATTCAACC GCTTGCGCCC
ATCACCCTGT ACACCTCGGG CAGTACCGGC ACACCGAAGC CCATCCATAA GACGCTCGCG
CAGTTCGATG CGGAAGTCGT GACCCTGGAG CAGCAATGGG GCAGGCAGAT CGGCGCTGGC
GCCATGCTGG CCAGCGTACC GCATCACCAT ATCTACGGGC TGCTTTTCCG CGTGTTCTGG
CCGCTGGCAG CCGGGCGTCC CTTCTGCCGT CAGACGCACG CGGAGCCCGC CGCCTTACAG
CAAGCGCTTG CGCAACATCC GGTAGCGGCG TTGGTATCGA GCCCGGCGCA ACTGGCGCGC
TGGCCGGTGC TGCCGCGCTT CGATGTGCTG CCGGCACTGC CGGCGGTGTT CTCATCTGGC
GGCCCACTGG ATGCAACGGC CGCTGCCGCG TTTGCGGCCA CCCACGGCAG CGCGCCGATC
GAAGTCTTCG GCAGCACTGA AACAGGTGGT ATCGCCTGGC GCCGCCAGGA CAGGACGCCT
GCATGGCAGC CCTTTGCACG CGTGCAGATC CGCCAGGAAG ATGACGGTGC ACTGGCAGTG
CGCTCGCCGC ACCTGCCGCA TGACAACTGG CATCGCACCG ACGACGCCAT CGCGTTCGAC
GACAGCGGGC GCTTCCTCCT GCGCGGCCGG CTGGACCGCG TCGTCAAGGT GGACGGCAAG
CGCATCGCCT TGCCTGAGGT CGAAGACTGG TTGGCCTCTC ACCCGTTTGT CGCCCGCGCG
GCCGTCACGC TGCTGGCGGG TGCATCGCGA GAAAGGCTCG GCGCGCTGGT TGCGCTCACG
CCGGCCGGCG TTGAAGGCTT GCGCACACTG GGCCGCGTAT CAGTGGCAAA GACACTGCGC
CGGCATCTGT CGACCTATAC CGACCCCACG CTGATCCCCC GCCGCTGGCG CTTTTGCATG
ACGATGCCGG TGGATGCACG GGGCAAGCTG CCGGCGTCGG TGATTGCCGC CGCCTTCCGG
TCCGGCGTGG AAGGTTTCGA AACCCTGTCG CATGCCAGCG ATGCCGAGGG CGACCATTAC
GAACTGCGCG TCAGCCCTGA CTTGATCCAC TTCAAGGGGC ACTTCCCCGG CCTGCCGATC
CTTCCCGGCG TGGTGCTGAT CGACTGGATC GTTCGCCTCG CTGCGACACG CGATCGCGCG
GTGCGCGCAA TGACCTCCAT CGATCAGCTC AAGTTCATGG CCCCGGTACC GCCGGGCGCG
GTGGTGTCGC TGCGCATCGT GCATGAGTCG GAGCGTCGCC GCGTGCGCTT CACTGCCCGG
ACGGGCGCGC GCGACTGCGC TTCTGGCACG CTGGTCTATC AGGAGGCTGC GTGA
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| Protein sequence | MIALRAQLHE ARPDDAVVCL DGAATMTYGM FHARVAAYAG AFTTQATTHY ALCIEDPFDF
ACALFALFAS GKHVVIPASA APAYLESLGT AFDALVTDAS LRSIDQHAEA VVGPIQPLAP
ITLYTSGSTG TPKPIHKTLA QFDAEVVTLE QQWGRQIGAG AMLASVPHHH IYGLLFRVFW
PLAAGRPFCR QTHAEPAALQ QALAQHPVAA LVSSPAQLAR WPVLPRFDVL PALPAVFSSG
GPLDATAAAA FAATHGSAPI EVFGSTETGG IAWRRQDRTP AWQPFARVQI RQEDDGALAV
RSPHLPHDNW HRTDDAIAFD DSGRFLLRGR LDRVVKVDGK RIALPEVEDW LASHPFVARA
AVTLLAGASR ERLGALVALT PAGVEGLRTL GRVSVAKTLR RHLSTYTDPT LIPRRWRFCM
TMPVDARGKL PASVIAAAFR SGVEGFETLS HASDAEGDHY ELRVSPDLIH FKGHFPGLPI
LPGVVLIDWI VRLAATRDRA VRAMTSIDQL KFMAPVPPGA VVSLRIVHES ERRRVRFTAR
TGARDCASGT LVYQEAA
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