Gene Rpic_4754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4754 
SymbolfliM 
ID6285320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1093608 
End bp1094615 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content62% 
IMG OID642619230 
Productflagellar motor switch protein FliM 
Protein accessionYP_001893265 
Protein GI187926920 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.767087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGG AAGAGTTTCT TTCCCAGGAG GAGATCGATG CGCTCCTCAA GGGCGTCAGC 
GACGAGGCGG ACGAGGAACC TGTCGAGGCC GACCCTTCAG GCATCCGCAC GTACAACCTC
GGGTCGCAGG AGCGCATCGT CCGTGGGCGC ATGCCCACGC TGGAAATCAT CAACGAGCGG
TTCGCGCGCA ACTGGCGCAT CGGACTGTTC AACTTCATGC GGCGCAACGC GGAGATCTCC
GTCGGTCCGG TGAAGGTGCA GAAGTACAGC GAGTTCATCC GCAACCTGGT GGTGCCGACC
TCGCTCAACC TCGTGCACGT CAAGCCGCTG CGCGGTACGG CGCTGTTCGT GTTCGACCCC
AACCTGATCT TCCTGGTGGT CGACAACCTG TTCGGCGGTG ACGGGCGTTT CCACATGCGC
GTGGAAGGCC GGGACTTTAC CGACGTGGAG CAGCGCATCA TCCAGCGCAT GCTGCAGCTT
GTCTTCGAGC ATTACGCCAG GGCATGGCAG CCGGTCTACC CGATCGACTT CGAATTCCTG
CGCATGGAGA TGCACACCGA GTTCGCCAAC GTGGCCACGC CCAATGAAGT GGTGGTCACC
ACCACCTTCA GCCTGGAGCT TGGCAACAAT GGCGGCGATG TGCACATCTG CATGCCGTAC
ACCATGATCG AGCCGATCCG CGACCGGCTG ACCTCCGCCA TCCAGGGTGA AGCACTGGAA
GTCGACAAGC GCTGGCTGCG GCTGCTGTCG CAGCAGGTGC AGACGGCTGA AGTGGAACTG
ATCGCCGACC TGGCAACGGC CAACGTGCAG GTCTCCGACA TTCTGAACAT GAAGGTGGGC
GACGTCATTC CGCTGGAACT GGACGATGTC GTGACCGCCA AGGTAGACGG CGTGCCCGTC
ATGGAATGCA ACTACGGCAC CTTCAACGGC CAATACGCGC TGCGGGTCAA CCGCATGCTG
AACATGAGCG GCAGCGAGCC TGCCACGGAG TCTGACGATG ACAACTGA
 
Protein sequence
MLKEEFLSQE EIDALLKGVS DEADEEPVEA DPSGIRTYNL GSQERIVRGR MPTLEIINER 
FARNWRIGLF NFMRRNAEIS VGPVKVQKYS EFIRNLVVPT SLNLVHVKPL RGTALFVFDP
NLIFLVVDNL FGGDGRFHMR VEGRDFTDVE QRIIQRMLQL VFEHYARAWQ PVYPIDFEFL
RMEMHTEFAN VATPNEVVVT TTFSLELGNN GGDVHICMPY TMIEPIRDRL TSAIQGEALE
VDKRWLRLLS QQVQTAEVEL IADLATANVQ VSDILNMKVG DVIPLELDDV VTAKVDGVPV
MECNYGTFNG QYALRVNRML NMSGSEPATE SDDDN