Gene Rpic_4748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4748 
Symbol 
ID6285289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1086320 
End bp1086742 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content67% 
IMG OID642619224 
Productflagellar protein FliS 
Protein accessionYP_001893259 
Protein GI187926914 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.304458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCAG CTCGCCGCGC CATCGGTGCC TACGCGCAAG TCGGCATCGA GACGTCCGTG 
GTGGACGCCA ATCCACACCG TCTGATCGCC ATGCTGTTCG AGGGCGCGCG CGCCGCCATC
AGCATGGCGA GCGCAGCCAT CCAGCGCGGC GACGTGCCTG CCAAGCTGCG CGCGGTCGAC
AAGGCCATTT CGATCATCGG CCAGGGCCTG CAGGCCAGCC TCGACCATCA GCGTGGCGGC
GAGATTGCCG CGCAGCTGAA TGGCTTGTAC GACTACATGC TCCGGCGCCT GCTGCTGGCC
AACGCCACCA ATGACGTTGG CGTCCTCGCC GAGGTCGACG GCTTGCTGGT GCCGCTGCAA
GAGGCCTGGG CCGCGATTGG CCAGCCCGGC GCGGTCAACA GCCACTTGAG CGTTGTGAGC
TGA
 
Protein sequence
MYAARRAIGA YAQVGIETSV VDANPHRLIA MLFEGARAAI SMASAAIQRG DVPAKLRAVD 
KAISIIGQGL QASLDHQRGG EIAAQLNGLY DYMLRRLLLA NATNDVGVLA EVDGLLVPLQ
EAWAAIGQPG AVNSHLSVVS