| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4684 |
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| Symbol | |
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| ID | 6285041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 1022302 |
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| End bp | 1023648 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642619161 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001893196 |
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| Protein GI | 187926851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.119437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.307779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCCA ATCAGGATGC GGCCACTCCG CGCCCCGCAG CCGGTGCGCG CGCGTCGCGA
CGTGCTGTTC TTTTCGCTGT GCTGGCCGCA ATGGCCGTCC ACACCAATGC CGCGCCGCCA
GTGCCTTCAC CGCGTGGTGC CCAGACCGCC ACTGCCCGCG CTGACGAGGC TCTTCCGCAG
CCGCGCTACA CCTTGCCGCA GTTGCTGGAG TTGGCCCGCG CCAACCACCC GGCGCTCGCC
GCTTCGCAGG CGCAGGTGCA GGCCGCGCAG GCGGGCACTG CCACCGCGCG CGCCTGGCCC
AACCCCGAGG TGGAAGCCAT GGCCGGCCGC CAGCGTGCCC GCATGCCGGG TGCGGCGGAA
GGCCGCACCA ATAGCGTGTC GATCACGCAA AAGCTCGACT TGCCGTGGCA GCGCGCGGCC
CGCACGCAAG CCGCCGATGC CGCGTACGAG GCGTCGCAGG CGACTGCCCG GTCGCAGGCA
CGTGACGTAG AGGCCGATTT GAAGCTGCGT TTCTACGACG TGGTACGCCG CGAGGCCGAG
CAGCGCAACG CGCGCGAAGA CGTGACGCTG GTCGAGCAGA TCCGCCGTGG CGTGGCCGTG
CGCGTGGAAA CCGGCGAGGC CCCGCGCTAC GAACTCATCC GTGGCGACGC AGAGCTGCTC
AATGCGCAGC GCAACGAGCA GGCCGCCGCA CTGCGCGTGC AACAGGCGCT GGCTGAACTG
CGCCGTGCCG TGGGCGCCGA TCTACCGCTC ACGTTCGACG TCGATGCCGG CACCGAGACG
CCATCCGTGG CGCATCTGCC GCCCCTGGCC GATCTGGTCA GTACGGTCGT CGCCACCCAT
CCCGAATTGG AAGCCGATCG CGCCGCCGTG CGCGAGGCCG AAGCGCGTCT CGCGCACGAG
CGCAGCCAAC GCTGGCCGTC GCTCGCGCTG CGCGGATCGG TCGATCGCCA GCCCGATCTG
CAGGACAGCC GCGTGGGCCT GGTGATGTCG ATTCCGCTGT TCGACCGACG TGAAGGCCCG
GTGGGCGAAG CCGTGGCTGC CCGCGAACGC GCCCGCGCCC TGTTGCGCGA CCGCGAGTTG
CGTGTGCGGC AGGCGGTGGA GTCCGCCTAT CGCCAATACG AGATCGCAGA GTCGCAAGTC
AGCGCGCTCG AATCCGGCGT CATCAAGCAG GCCGAATCGG CGCTGCGCGT GGCCGAAGCC
GCATACCGCC ACGGCGAGCG CGGGATTCTC GACTACCTCG ATGCCCAGCG CGTCTTCCGC
CAGGCACGCA ACGACCTGAT TGCCGCACGC GCAGACCTGC GCACCGCCGC CGTTGAACTC
GACCGCCTGC GCCCGGAGGC CCAATGA
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| Protein sequence | MLSNQDAATP RPAAGARASR RAVLFAVLAA MAVHTNAAPP VPSPRGAQTA TARADEALPQ
PRYTLPQLLE LARANHPALA ASQAQVQAAQ AGTATARAWP NPEVEAMAGR QRARMPGAAE
GRTNSVSITQ KLDLPWQRAA RTQAADAAYE ASQATARSQA RDVEADLKLR FYDVVRREAE
QRNAREDVTL VEQIRRGVAV RVETGEAPRY ELIRGDAELL NAQRNEQAAA LRVQQALAEL
RRAVGADLPL TFDVDAGTET PSVAHLPPLA DLVSTVVATH PELEADRAAV REAEARLAHE
RSQRWPSLAL RGSVDRQPDL QDSRVGLVMS IPLFDRREGP VGEAVAARER ARALLRDREL
RVRQAVESAY RQYEIAESQV SALESGVIKQ AESALRVAEA AYRHGERGIL DYLDAQRVFR
QARNDLIAAR ADLRTAAVEL DRLRPEAQ
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