Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4667 |
Symbol | |
ID | 6284981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 997287 |
End bp | 998672 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642619144 |
Product | nitrite transporter |
Protein accession | YP_001893179 |
Protein GI | 187926834 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.885517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCAA ACGTCCTCAC CCACTGGGAG CCCGAGAACC CCTCGTTCTG GCGCGTCACC GGCCAATCGG TGGCGTATCG CAACCTGTGG ATCTCCATTC CCGCCCTGAT GATCGCGTTC GCGGTCTGGT CCTTGTGGAG CGTGGTGGTG GTCAACCTCG ACAAGGCAGG CTTTGCGCTG ACCAAGAACC AGATGTTCTG GCTCACCGCG CTGCCTGCCC TGTCGGGGGC CACCCTGCGC ATCTTCTACT CGTTCCTGGT GCCCATCTTC GGCGGCCGCC GCTGGACGGC GCTGTCCACC GCCAGTCTGT TGATTCCTGC GCTCGGCATG GGCTTCGCGC TGCGCGATCC GCAGACGAGC TATCCGATGC TGCTCGTGCT TGCACTACTG TGCGGCCTGG GCGGCGGCAA TTTCAGCTCG TCGATGGCGA ACATCAGTTT CTTCTTCCCC AAGCAGAAGA AAGGGCTGGC CACGGGGCTG AACGCCGGCA TCGGCAACCT GGGGGTGTCG GTCGTGCAGT TCGTCACGCC GCTGGTGATT TCGGTGGGTG TCTTCGGTGC GCTGGGCGGT GACCCGCAAA CCTACACGGC AGGTGGCGTT GAGCGCAGCC TGTGGCTGCA GAACGCGGGC TTCATCTGGG TGCCGTTCAT CGTGGTGGCC ACGCTGGCCT CGTGGTTCGG CATGCACGAC ATTGCCGACG CCAAGGCTTC GTTTGCTGAT CAGGCCGTCA TTTTCAAGCG CACCCACAAC TGGCTGATGT GCCTGCTGTA TGTCGGCACG TTCGGCTCGT TCATCGGCTT CTCGGCTGGC CTGGCGCTGC TGACCAAATC GCAGTTCCCC AACGTGAACC CGACCACGTA TGTCTTCCTC GGTCCGCTGG CCGGTGCGCT CACGCGGCCC GTGGGCGGAT GGATCTCCGA CAAGGTGGGC GGCGCGCGTG TCACGCTCTG GACGTTTGCC GGCATGATCG CCGCCGTGGT CGGCGTGTTG ACCTTCCTGC CGGCAGACGG CTATGCGGGC AGCTTCGTCG GCTTCCTGTC CATGTTCATC GTGCTGTTCG CGCTGACGGG CATCGGCAAT GGCTCGACCT TCCGCATGAT CCCGATCATC TTCCTCACGC AGCACCAGCG CGCGGCGCGC GGCAAGGATG AAGCCGCCCA ACGGCAGGCC GTGCAGGATG CCGGCAAGGA ATCGGCGGCC GTCCTGGGCT TTACCGGTGC CATCGGCGCG TATGGCGGCT TCTTCATTCC GAAGAGCTTC GGCACCTCGC TGGAACTGAC CGGCTCGGTC AACGCCGCGC TGTACTGCTT CATTTCGTTC TACGTGCTGT GCCTGCTGGT GACGTGGGCG GTGTATGCCC GCCGCAATGC GCCGATGCCC TGCTGA
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Protein sequence | MTSNVLTHWE PENPSFWRVT GQSVAYRNLW ISIPALMIAF AVWSLWSVVV VNLDKAGFAL TKNQMFWLTA LPALSGATLR IFYSFLVPIF GGRRWTALST ASLLIPALGM GFALRDPQTS YPMLLVLALL CGLGGGNFSS SMANISFFFP KQKKGLATGL NAGIGNLGVS VVQFVTPLVI SVGVFGALGG DPQTYTAGGV ERSLWLQNAG FIWVPFIVVA TLASWFGMHD IADAKASFAD QAVIFKRTHN WLMCLLYVGT FGSFIGFSAG LALLTKSQFP NVNPTTYVFL GPLAGALTRP VGGWISDKVG GARVTLWTFA GMIAAVVGVL TFLPADGYAG SFVGFLSMFI VLFALTGIGN GSTFRMIPII FLTQHQRAAR GKDEAAQRQA VQDAGKESAA VLGFTGAIGA YGGFFIPKSF GTSLELTGSV NAALYCFISF YVLCLLVTWA VYARRNAPMP C
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