Gene Rpic_4666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4666 
Symbol 
ID6284978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp995921 
End bp997237 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content65% 
IMG OID642619143 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001893178 
Protein GI187926833 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCG CTACTGCCAC CTCTCCTGCC ATTGCGGCGC AAGCCGCCGT CGCGCCTCGC 
GCCTATGCGG TGCTCGCGTC CAGTACGTTC GCCTTCACCA TCTGCTTTGC GGTGTGGACG
ATGTTCGCCA TTCTCGGCAT TCCGCTGCAG AAGCAGCTCG GCCTGTCCGA AACCGAGTTC
GGCCTGATAG CGTCCATGCC GGTGCTGACG GGCTCGCTCG TGCGCGTGCC CCTGGGCATG
TGGACAGACC GCTTTGGCGG TCGCATCGTG TTCTTCCTGC TGATGCTCGC CACCGTAGCG
CCCATCTGGT TTGTCGCCGA CGCAACGCAG CTTTGGCAGT TCCTGGCGCT CGGGATGCTG
GTGGGCCTGG CCGGCGGCTC CTTCTCCGTA GGCACGCCGT ATGTGGCGCG CTGGTTCCCC
AAGAAGCGCC AGGGCTTTGC CATGGGCATC TTCGGTGCAG GCAATGCTGG CGCGGCGTTG
AACAAGTTTG TCGCGCCGCT GCTGGTGCTG TCCGCCGGCA CATGGACCGT CGTGCCACGC
GTGTATGCGA TGGCCATGCT CGTGACCGCA CTGCTGTTCT GGTTCGGCTC CGCGACCGAT
CCGTCGCACG CCACGGGCAA GTCGGTGTCG CTGCGCGCGC AGCTGCGCGA AATGCGCGAC
CCCCGCGTCT GGCGCTATGC GCAGTATTAC TCGGTGGTCT TCGGCGGTTA TGTGGGGCTG
TCGCTGTGGC TCACGCGCTA CTACGTCGCG GAATACGGCT TCTCGATCAA GACCGCGGCC
TTCCTGGCAG CCTGTTTCTC CCTGCCGGGC GGCGTGCTGC GCGCGGTGGG CGGCTGGCTG
TCCGACCGTT ACGGCGCCTA TCGCACGACC TGGGCAGTGA TGTGGGTGTG CTGGGTCGCG
TTCTTCCTGC TCAGCTATCC GCAGACCCGG TTCACCATCA CCGGCACCCA CGGCCCGCTG
GACTTCCACA TCGGGCTGTC GCCCGTGGCG TTCACCTCGC TGATGGGCGT GGTGGGTGTG
GCAATGGCCA TCGGCAAGGC GTCCGTCTTC AAGTTCATCT CGAATGACTT CACCGACAAC
ATCGGTGCGG TATCGGGTGC GGTGGGCCTT GCCGGTGGTC TGGCGGGGTT CGTCCTGCCG
ATCCTGTTTG GCGTGCTGGT CGATCTCACG GGCATTCATT CCACCTGCTT CATGTTGCTG
TACGGCGCGG TGTGCGTCAG CCTGGTGTGG ATGCACTTCA GCTTTCGCGC CGAGGGGCGG
GCCACATTGA TCGGCAGGTC GTCTTCCACC GCATCCCTCG CGCAACGCCT CTCCTGA
 
Protein sequence
MSSATATSPA IAAQAAVAPR AYAVLASSTF AFTICFAVWT MFAILGIPLQ KQLGLSETEF 
GLIASMPVLT GSLVRVPLGM WTDRFGGRIV FFLLMLATVA PIWFVADATQ LWQFLALGML
VGLAGGSFSV GTPYVARWFP KKRQGFAMGI FGAGNAGAAL NKFVAPLLVL SAGTWTVVPR
VYAMAMLVTA LLFWFGSATD PSHATGKSVS LRAQLREMRD PRVWRYAQYY SVVFGGYVGL
SLWLTRYYVA EYGFSIKTAA FLAACFSLPG GVLRAVGGWL SDRYGAYRTT WAVMWVCWVA
FFLLSYPQTR FTITGTHGPL DFHIGLSPVA FTSLMGVVGV AMAIGKASVF KFISNDFTDN
IGAVSGAVGL AGGLAGFVLP ILFGVLVDLT GIHSTCFMLL YGAVCVSLVW MHFSFRAEGR
ATLIGRSSST ASLAQRLS