Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4535 |
Symbol | |
ID | 6285965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 860163 |
End bp | 861434 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642619016 |
Product | fumarylacetoacetase |
Protein accession | YP_001893052 |
Protein GI | 187926707 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.113775 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.91176 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC GACAACTAAG CTGGCTAGAA TCCGCCAACA CCCCCGACAC GCACTTCCCC CTGGAAAACC TGCCCTTCGG CATCTTCTCC ACCAAGGAAA ACCCGTCGCC ACGCGCAGGC GTCGCGCTGG GCGATCAAGT CATCGATCTC GGCGTGCTGG ATGACGCCGG CCTGCTGCCC GCATCCACAC GCGGCACGTT CCGCACCGGC AAGCTCAACA GTTTCATCGC CCTCGGCAAG CCCGTCTGGG CGGAAACGCG CAAGAAGCTG CAAGCGCTGT TCAGCGTGGC CGACACCCAC GTACGCGACA ACGCCACGCT GCACGCGCGC GCGCTGGTGC CGCAGGCGCA TGCGGTGATG CATCTGCCCA TCGACATCCC GGGCTATACC GATTTCTATT CATCGAAGGA ACACGCCACC AACGTCGGCC GCATGTTCCG CGACCCCGAG AACGCGCTGC TGCCCAACTG GCTGGAAATC CCGATCGGCT ACAACGGCCG CGCCAGCTCC GTGGTGGTGA GCGGCACACC GCTGCACCGC CCCATGGGCC AGATCAAGCT GCCCGACCAG CCGCGTCCGA TCTTCACGGC CTGCCGCAAG CTGGACTACG AACTGGAGAT GGCCTTTGTG GTCGGCAAGC CGAGCGCGCT GGGTGAGCCG GTTTCCGTCG ACGCGGCACC GGATCATATG TTCGGCGTCG TGCTCCTCAA CGACTGGAGC GCGCGCGACA TCCAGCAATG GGAATACGTG CCGCTCGGCC CGTTCAACTC GAAGGGGTTC GGTACATCGA TCTCGCCATG GATCGTGACG ATGGACGCGC TGGAGCCGTT CCGCGTGGCC AACCCGGTGC AATCGCCTGA GCCGCTGGAA TACCTGCGCC AGAGCCACCC CAACGCTTAC GACATCGCCC TCGAAACCGC GCTGCGCCCC CACGGCGGCG AACGCACCAC CATCGCCCGC ACCAACTTCC GCGCGATGTA CTGGACGATG GCGCAACAGC TTGCACACCA CACCGTATCC GGCTGCAACG TGCGCGTGGG CGACCTGATG GGCTCCGGCA CCATCAGCGG CACGACGCCG GATTCGTACG GCAGCCTGCT GGAGCTGACG CTCAACGGCA AGCAGCCGCT TGATCTCGGC AACGGCACCA CGCGCGCGTT CCTGGAGGAC GGCGACGAAG TCATCATGAC CGGCTGGTGC CAGGGCGATG GCTATCGTGT GGGCTTTGGG GAAGTGCGCG GCGAAATCCT GCCGACGCGC GGCGTGAACT AA
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Protein sequence | MTTRQLSWLE SANTPDTHFP LENLPFGIFS TKENPSPRAG VALGDQVIDL GVLDDAGLLP ASTRGTFRTG KLNSFIALGK PVWAETRKKL QALFSVADTH VRDNATLHAR ALVPQAHAVM HLPIDIPGYT DFYSSKEHAT NVGRMFRDPE NALLPNWLEI PIGYNGRASS VVVSGTPLHR PMGQIKLPDQ PRPIFTACRK LDYELEMAFV VGKPSALGEP VSVDAAPDHM FGVVLLNDWS ARDIQQWEYV PLGPFNSKGF GTSISPWIVT MDALEPFRVA NPVQSPEPLE YLRQSHPNAY DIALETALRP HGGERTTIAR TNFRAMYWTM AQQLAHHTVS GCNVRVGDLM GSGTISGTTP DSYGSLLELT LNGKQPLDLG NGTTRAFLED GDEVIMTGWC QGDGYRVGFG EVRGEILPTR GVN
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