Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4532 |
Symbol | |
ID | 6284986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 857316 |
End bp | 858233 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619013 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001893049 |
Protein GI | 187926704 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.695585 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAATC TGCGGGATGT GGACCTGAAC CTGCTGGTGC TGTTTCAGGA AATCCTGCGC GAAAAGCGCA TTTCCATCGT GGCCGAGCGG CTGGGCCTGT CGCAACCGGC GGTGAGCAAC GCGCTGTCGC GCCTGCGCCA GACCTTTGAC GACGAACTCT TTGTCCGCAC GCCGCGCGGC ATGATGCCGA CGGCACTTGC CGAGCAATTG GCTGAACCGG TGGCCACCGC GCTCGACACG CTGCAACGCG CCTTCGGCCA GCGCACGCAC TTTGATGCGG CCACTTCCAC GCGCACCTTC ACCATTGCCA TGAGCGATGT CGGCGAGGTG TATTTCATGC CGTTGCTGGC GCAGTTCTGT GCAGAGCAGG CACCCGGCGT GCGCCTCGAC ACCCAGCGTG CGGGCGGGTT CGACATGAAA GCCGAGATGG AGGCCGGTGC CATCGACCTC GCCATCGGCG CCTTCGATGA TCTTTCCGGC GAGAGCCTCT TCCAGCGCCG CCTGTTCCGG CAGGATTACG TGACCATGTT CCGGCGCGGC CATGCGCTGT CCGAGGGCAA GCTCACGCTG GAGCGCTTTC GCGCCGCGTC GCACCTTGTG GTGGCGAGTT CAGCGAGCCC CTACAACGCC ATCGGGCCGC TGCTGGACAA GGCGGGCATC ACGCAGTCGG CGCGCTTTTC GGTGCCGCAC TTCGTGGCGG TGCCGTACAT CGTCAGCACG ACCGATCTGG TGGTGACGGT GCCGCGCAAG CTGGCCGAGC GCGCGGCGCC GCCGTTTGGG TTGGAGTTCG TGGCACCGCC GCTCAAGCTG CCCGCGCTGC AAACGAATGT GTTCTGGCAC CGGCGTTTCC ATCAGGACGC CGGCAACCAG TGGCTGCGCA ACGTGGTCGC GCAGCGCTTT GCAGAGCTGG AAGCCTGA
|
Protein sequence | MLNLRDVDLN LLVLFQEILR EKRISIVAER LGLSQPAVSN ALSRLRQTFD DELFVRTPRG MMPTALAEQL AEPVATALDT LQRAFGQRTH FDAATSTRTF TIAMSDVGEV YFMPLLAQFC AEQAPGVRLD TQRAGGFDMK AEMEAGAIDL AIGAFDDLSG ESLFQRRLFR QDYVTMFRRG HALSEGKLTL ERFRAASHLV VASSASPYNA IGPLLDKAGI TQSARFSVPH FVAVPYIVST TDLVVTVPRK LAERAAPPFG LEFVAPPLKL PALQTNVFWH RRFHQDAGNQ WLRNVVAQRF AELEA
|
| |