Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4483 |
Symbol | |
ID | 6285594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 803616 |
End bp | 804347 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642618962 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_001893003 |
Protein GI | 187926658 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.183908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCACC CCGTCGCCAC ATCCGGCACG CTGGACGCCC GCTCGTACCG CGAACGCCTG CACGCCAGCA GCTGGTTCGG CACGCTCGGG GCAACCTTGC AAGACGCATT GATCGACATC GCGGCAGTGC GCCGCTTGGG CGCTGGGGAG ATCCTCTTCC AGCGTGGCGA CGCGCCCGAC GGCCTCTACT GCGTGGTGGA AGGCACGATC CGCATCGGCG CCACCAGCGC AGACGGGCGC GAAGCGCTGC TGGCTGTACT GGAACCCGTC AACTGGTTTG GCGAGATCGG CGTGTTCGAC CGCCAGCCCC GCACGCATGA CGCCCGCGCC GACGGCCATA CGACATTGCT GCATATGCCG CAGGCGGCGC TGATCGCCTT GCTGGATGGC TCGCCCGCGC TGCTGCATGC GTTTGCCCTG CTGCTGACTC ACAAGCTGCG CCTGACATTC ATCGTGCTGG AAGAGACCGC CCTCCTGCCC GCCCCCGTGC GTGTGGCGCG GCGCCTGCTA CTGATGGCGG ACGGCTACGG CGACCTGCGC CTGGGCACGC GGCGTGTGCT GCACGTGCCA CAGGAGCAGC TTGCGCAATT GCTGTCACTG TCCCGGCAGA CCGTGAATCA GGTTTTGAAG GAATTCGAAG CGCACGGCAT CCTCAGGCTG GCTTACGGAG AAATCGAACT GCTGGACTTT GCGGGCCTGC ATCGGCTTGC ATACGAGGTG GGAAGGGGAT GA
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Protein sequence | MDHPVATSGT LDARSYRERL HASSWFGTLG ATLQDALIDI AAVRRLGAGE ILFQRGDAPD GLYCVVEGTI RIGATSADGR EALLAVLEPV NWFGEIGVFD RQPRTHDARA DGHTTLLHMP QAALIALLDG SPALLHAFAL LLTHKLRLTF IVLEETALLP APVRVARRLL LMADGYGDLR LGTRRVLHVP QEQLAQLLSL SRQTVNQVLK EFEAHGILRL AYGEIELLDF AGLHRLAYEV GRG
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