Gene Rpic_4483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4483 
Symbol 
ID6285594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp803616 
End bp804347 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID642618962 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_001893003 
Protein GI187926658 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.183908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACC CCGTCGCCAC ATCCGGCACG CTGGACGCCC GCTCGTACCG CGAACGCCTG 
CACGCCAGCA GCTGGTTCGG CACGCTCGGG GCAACCTTGC AAGACGCATT GATCGACATC
GCGGCAGTGC GCCGCTTGGG CGCTGGGGAG ATCCTCTTCC AGCGTGGCGA CGCGCCCGAC
GGCCTCTACT GCGTGGTGGA AGGCACGATC CGCATCGGCG CCACCAGCGC AGACGGGCGC
GAAGCGCTGC TGGCTGTACT GGAACCCGTC AACTGGTTTG GCGAGATCGG CGTGTTCGAC
CGCCAGCCCC GCACGCATGA CGCCCGCGCC GACGGCCATA CGACATTGCT GCATATGCCG
CAGGCGGCGC TGATCGCCTT GCTGGATGGC TCGCCCGCGC TGCTGCATGC GTTTGCCCTG
CTGCTGACTC ACAAGCTGCG CCTGACATTC ATCGTGCTGG AAGAGACCGC CCTCCTGCCC
GCCCCCGTGC GTGTGGCGCG GCGCCTGCTA CTGATGGCGG ACGGCTACGG CGACCTGCGC
CTGGGCACGC GGCGTGTGCT GCACGTGCCA CAGGAGCAGC TTGCGCAATT GCTGTCACTG
TCCCGGCAGA CCGTGAATCA GGTTTTGAAG GAATTCGAAG CGCACGGCAT CCTCAGGCTG
GCTTACGGAG AAATCGAACT GCTGGACTTT GCGGGCCTGC ATCGGCTTGC ATACGAGGTG
GGAAGGGGAT GA
 
Protein sequence
MDHPVATSGT LDARSYRERL HASSWFGTLG ATLQDALIDI AAVRRLGAGE ILFQRGDAPD 
GLYCVVEGTI RIGATSADGR EALLAVLEPV NWFGEIGVFD RQPRTHDARA DGHTTLLHMP
QAALIALLDG SPALLHAFAL LLTHKLRLTF IVLEETALLP APVRVARRLL LMADGYGDLR
LGTRRVLHVP QEQLAQLLSL SRQTVNQVLK EFEAHGILRL AYGEIELLDF AGLHRLAYEV
GRG