Gene Rpic_4473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4473 
Symbol 
ID6285470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp790877 
End bp791902 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content63% 
IMG OID642618952 
Product2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component 
Protein accessionYP_001892993 
Protein GI187926648 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID[TIGR03261] putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.144148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC GTCTTTCCCT GCTGGCCGCC GCAATCACGT CGGCAACGAT GGCGTTTGCC 
ACGTCGGCGT TCGCCAAGAC CACGCTGACC GTGTACACGG CGCTGGAAGC TGACCAAGTG
AAGGCATACC AGGACGCCTT CGAGAAGGCC AATCCGGATA TCGAAATCAA GTGGGTGCGC
GACTCCACCG GCGTCGTCAC CGCCAAGCTG CTGGCCGAGA AGAACAACCC GCGTGCCGAC
GTGGTGTGGG GCCTGGCCGC ATCGAGCCTG GCCATCCTGG ACAAGGAAGG CATGCTGACG
CCGTACGCAC CGGCCGATCT GTCGAAGATC GGTGCGACTT ACCGCGACAA GGCCAACCCG
CCGGCATGGG TGGGCATGGA TGCCTGGGGC GCCGCCATCT GCTTCAACAC CGTCGAAGCA
CAGAAGCAGA ATCTGCCGAA GCCGACGTCG TGGGCCGACC TGACCAAGCC CGTGTATGCC
GGCAAGATCG TCATGCCGAA CCCGGCATCG TCGGGCACCG GCTACCTCGA CGTGAGCGCG
TGGCTGCAGA TGATGGGCGA GCAGAAGGGC TGGGCCTACA TGGACGCGCT GCACCAGAAC
ATCGGCCAGT ACACGCACTC GGGCTCCAAG CCTTGCAAAA TGGCCGCCTC GGGCGAGTTC
CCGATCGGTA TCGCGTTCGA ATACCGCGCG GTGAAGTCGA AGAAGGAGGG CGCCCCGATC
GATATCGTGC TGCCGTCGGA AGGCCTGGGC TGGGACGTGG AAGCGACCGG CATCATGAAG
GGCACCAAGA ACCTGGAAGC GGCCAAGAAG CTGGCTGACT TCTCGGCAAG CCCGGCTGCG
ATGGCGCTGT ACGAGAAGAA CTTTGCCGTG GTCGCCACGC CCGGCTTCTC CAAGCCGGAT
CCGCTGCTGC CGGCCGACTA CGAAAAGCAT TTGATCAAGA ACGACTTTGC ATGGGCCAGC
GCCAACCGCG ATCGCATCCT CGCCGAGTGG ACGAAGCGCT ACGACGGCAA GTCGGAGAAG
AAGTAA
 
Protein sequence
MTARLSLLAA AITSATMAFA TSAFAKTTLT VYTALEADQV KAYQDAFEKA NPDIEIKWVR 
DSTGVVTAKL LAEKNNPRAD VVWGLAASSL AILDKEGMLT PYAPADLSKI GATYRDKANP
PAWVGMDAWG AAICFNTVEA QKQNLPKPTS WADLTKPVYA GKIVMPNPAS SGTGYLDVSA
WLQMMGEQKG WAYMDALHQN IGQYTHSGSK PCKMAASGEF PIGIAFEYRA VKSKKEGAPI
DIVLPSEGLG WDVEATGIMK GTKNLEAAKK LADFSASPAA MALYEKNFAV VATPGFSKPD
PLLPADYEKH LIKNDFAWAS ANRDRILAEW TKRYDGKSEK K