Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4449 |
Symbol | |
ID | 6285884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 763293 |
End bp | 764702 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642618928 |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_001892969 |
Protein GI | 187926624 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.644266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGTTGC AATCGATCGA GTCCGGCGCA CGCACGCACA CACCGCGGGT GACGGAGATG CAGGTGATTC CCGTCGCGGG TCGCGACAGC ATGCTGCTGA ACCTGTGCGG CGCGCATGCA CCGTTCTTTA CGCGCAACCT CGTGATCCTG AAGGACAACG CCGGGCGTAC CGGCGTGGGC GAGGTGCCGG GCGGGGAGGG CATCCGCCAA GCGCTGGAGC GTGTGATTCC GCTGGTGGTC GGTCAATCGA TCGGTCGTAC CAATGGCGTG CTGAGCAGCA TTCGCCGGGC GCTGGCCGGT GGCGGCAATG CCGCGCATCA GGCGACGGTG CACCAGGTGA CCTCCGCTTC GGAAGCGGCA GTGCTGCGCC AGCCGCACGA GATCAACCTG CGCATGGACA ACGTCATCAC GGCGGTGGAA GCGGCGCTGC TCGATCTGCT TGGTCAGTTT CTCGAAGTGC CGGTGGCGGA GTTGCTGGGC GCCGGCCAGC AGCGCGATAG CGCGCCGATG CTCGCGTACC TGTTCTACGT GGGCGATCGT CGCAAGACCG ATCTGCCGTA CCTGGAGGGC GCCAACGGCG CAGACGACTG GCTGCGCTTG CGCCACGAAG CTGCCATGAC ACCCGCCGCC ATCGCCCGCC TGGCCGAAGC CGCCACCGAG CGCTACGGTT TTGCCGATTT CAAGCTCAAG GGCGGCGTGA TGCCCGGCGC TGAAGAGATG GAAGCGATTG CCGCCATCAA GGCGCGCTTT CCGCACGCCC GCGTCACGCT GGACCCGAAT GGTGCATGGT CGCTCAACGA GGCAATTGCG CTGTGCAAGG GCCAAGGGCA TCTAGTGGCC TATGCCGAAG ACCCGTGCGG CCCCGAAGCC GGTTACTCGG GCCGCGAGGT GATGGCCGAG TTCAAGCGTG CCACCGGTAT CCCGACGGCC ACCAACATGA TCGCCACCGA CTGGCGCCAG ATGGGCCACG CAGTCCAGCT GCACGCAGTC GACATTCCGC TGGCCGATCC GCATTTCTGG ACCATGCAAG GCTCCGTGCG CGTCGCGCAG CTTTGCGACG AGTGGGGTCT GACTTGGGGC TCGCATTCCA ACAATCACTT CGATGTGTCG CTGGCGATGT TCACGCATGT GGCCGCCGCC GCGCCGGGCA ACATCACGGC CATCGATACG CACTGGATCT GGCAGGAGGC CCAGGAGCGC CTGACGCGCG AGCCGCTGCG CATCCAGGGC GGCCACGTGG CCGTGCCGGA GCGCCCGGGC CTTGGCATCG AAATCGACAT GGACCGCGTC ATGGCCGCCC ATGCGCTGTA CAAGACCCTG GGCCCTGGCG CGCGTGATGA CGCCATGGCC ATGCAATACC TCGTGCCGGG CTGGACGTAT GACCCGAAAC GCCCGAGCCT GAGGCGCTGA
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Protein sequence | MTLQSIESGA RTHTPRVTEM QVIPVAGRDS MLLNLCGAHA PFFTRNLVIL KDNAGRTGVG EVPGGEGIRQ ALERVIPLVV GQSIGRTNGV LSSIRRALAG GGNAAHQATV HQVTSASEAA VLRQPHEINL RMDNVITAVE AALLDLLGQF LEVPVAELLG AGQQRDSAPM LAYLFYVGDR RKTDLPYLEG ANGADDWLRL RHEAAMTPAA IARLAEAATE RYGFADFKLK GGVMPGAEEM EAIAAIKARF PHARVTLDPN GAWSLNEAIA LCKGQGHLVA YAEDPCGPEA GYSGREVMAE FKRATGIPTA TNMIATDWRQ MGHAVQLHAV DIPLADPHFW TMQGSVRVAQ LCDEWGLTWG SHSNNHFDVS LAMFTHVAAA APGNITAIDT HWIWQEAQER LTREPLRIQG GHVAVPERPG LGIEIDMDRV MAAHALYKTL GPGARDDAMA MQYLVPGWTY DPKRPSLRR
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