Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4445 |
Symbol | |
ID | 6285345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 758542 |
End bp | 759843 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618924 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001892965 |
Protein GI | 187926620 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0453314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCA TCAAAGGCTT GCGCTGGTGG ATCATCGGCC TCGTACTCAG CGGCCTGATC ATGAACTACC TGGCGCGTAA TGCGCTGGCG GTGGCGGCGC CTGAAGTCAA CAAGGTGCTG AACATCAGCA CGCAGCAGTA CGGCTACATC GTCGCGGCAT TCCAGGCGGC CTACATGGTG ATGCAGCCGG TGGCGGGCTA TGTGCTCGAC GTGCTGGGCA CCAAGCTGGG TTTTGCGCTG TTTGCGGCGG CGTGGTCGGT GGTCTGCCTG CTGCACAGCA CGGCCGGCAG CTGGCTGTCG CTGGCGGCGT TCCGCGCGAT GCTGGGGATG ACGGAGGCGG CGGGTTTCCC GTCGGCGCTG CGGGCAACGG CGGAGTGGTT CCCGGCCAAG GAGCGGTCGA TTGCAACCGG CTGGTTCAAC ATCGGCTCGT CCGTGGGGGC GGTGGTGGCG CCTCCTCTGG TGGTCTGGTG CATTTTGCAC GGCAACTGGC GCTTTGCCTT TGCCGTGATC GGCGGCATCG GGCTGGTGTG GAGCGTGCTG TGGTTCCTGC TGTATCGCGT GCCGGCCAAA CACCATCGCC TGTCGGAGGA AGAGCGCAAC TACATCCGCG CCGGCCAGGA AACGCCGGAC GACGACGCCA ACGTGCCCAA GCCTTCATGG GGCAAGATCG TCAGCGGCCG CCGCTTCTGG GGTATCGCCA TTCCGCGCTT TCTGTCGGAG CCGGCGTGGC AGACGTTCAA CTATTGGATT CCGCTCTATA TGGCTACCGA GCGCCATATG AACCTGAAGG AGATCGCGCT CTTTGCGTGG CTGCCGTTCC TGGCGGCGGA TGTGGGCTGC GTGCTGGGCG GCTACCTGGC GCCATGGTTC CAGAGGCGGT TCTCGGTGTC GCTTGTCACG TCGCGCAAGC TCGTGATGGT GACGGGCTGC CTGTGCATGA TCGGCCCCGC CTGCATTGGA CTGGCGACGA GTCCATACAC GGCGATTGCG CTGTTCTGCG TGGGCGGTTT CGCGCACCAG ACGCTCTCCG GCGCGCTATA CACGCTCACG TCGGACATGT TCGGCAAGCA TGAAGTCGGC ACGGCCGTGG GGCTGGCGGG CATGTCGGGT TACATGGGCG GCATGCTGTT CTCCCTGGCG GTCGGTACGC TCGCAACCAC CATCGGCTAC AACCCGCTGT TCGTGGCGCT GGCCGTGTTC GACATCGTGG CCGCCATCCT CGTGTGGACG TTGCTCAACG ACAAGCAGGC CCGCCCCGTG CCGATGCAGC CCGGCGGGAC GGCGCCCAGT ACTGCGGCCT GA
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Protein sequence | MKPIKGLRWW IIGLVLSGLI MNYLARNALA VAAPEVNKVL NISTQQYGYI VAAFQAAYMV MQPVAGYVLD VLGTKLGFAL FAAAWSVVCL LHSTAGSWLS LAAFRAMLGM TEAAGFPSAL RATAEWFPAK ERSIATGWFN IGSSVGAVVA PPLVVWCILH GNWRFAFAVI GGIGLVWSVL WFLLYRVPAK HHRLSEEERN YIRAGQETPD DDANVPKPSW GKIVSGRRFW GIAIPRFLSE PAWQTFNYWI PLYMATERHM NLKEIALFAW LPFLAADVGC VLGGYLAPWF QRRFSVSLVT SRKLVMVTGC LCMIGPACIG LATSPYTAIA LFCVGGFAHQ TLSGALYTLT SDMFGKHEVG TAVGLAGMSG YMGGMLFSLA VGTLATTIGY NPLFVALAVF DIVAAILVWT LLNDKQARPV PMQPGGTAPS TAA
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