Gene Rpic_4445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4445 
Symbol 
ID6285345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp758542 
End bp759843 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content65% 
IMG OID642618924 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001892965 
Protein GI187926620 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0453314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA TCAAAGGCTT GCGCTGGTGG ATCATCGGCC TCGTACTCAG CGGCCTGATC 
ATGAACTACC TGGCGCGTAA TGCGCTGGCG GTGGCGGCGC CTGAAGTCAA CAAGGTGCTG
AACATCAGCA CGCAGCAGTA CGGCTACATC GTCGCGGCAT TCCAGGCGGC CTACATGGTG
ATGCAGCCGG TGGCGGGCTA TGTGCTCGAC GTGCTGGGCA CCAAGCTGGG TTTTGCGCTG
TTTGCGGCGG CGTGGTCGGT GGTCTGCCTG CTGCACAGCA CGGCCGGCAG CTGGCTGTCG
CTGGCGGCGT TCCGCGCGAT GCTGGGGATG ACGGAGGCGG CGGGTTTCCC GTCGGCGCTG
CGGGCAACGG CGGAGTGGTT CCCGGCCAAG GAGCGGTCGA TTGCAACCGG CTGGTTCAAC
ATCGGCTCGT CCGTGGGGGC GGTGGTGGCG CCTCCTCTGG TGGTCTGGTG CATTTTGCAC
GGCAACTGGC GCTTTGCCTT TGCCGTGATC GGCGGCATCG GGCTGGTGTG GAGCGTGCTG
TGGTTCCTGC TGTATCGCGT GCCGGCCAAA CACCATCGCC TGTCGGAGGA AGAGCGCAAC
TACATCCGCG CCGGCCAGGA AACGCCGGAC GACGACGCCA ACGTGCCCAA GCCTTCATGG
GGCAAGATCG TCAGCGGCCG CCGCTTCTGG GGTATCGCCA TTCCGCGCTT TCTGTCGGAG
CCGGCGTGGC AGACGTTCAA CTATTGGATT CCGCTCTATA TGGCTACCGA GCGCCATATG
AACCTGAAGG AGATCGCGCT CTTTGCGTGG CTGCCGTTCC TGGCGGCGGA TGTGGGCTGC
GTGCTGGGCG GCTACCTGGC GCCATGGTTC CAGAGGCGGT TCTCGGTGTC GCTTGTCACG
TCGCGCAAGC TCGTGATGGT GACGGGCTGC CTGTGCATGA TCGGCCCCGC CTGCATTGGA
CTGGCGACGA GTCCATACAC GGCGATTGCG CTGTTCTGCG TGGGCGGTTT CGCGCACCAG
ACGCTCTCCG GCGCGCTATA CACGCTCACG TCGGACATGT TCGGCAAGCA TGAAGTCGGC
ACGGCCGTGG GGCTGGCGGG CATGTCGGGT TACATGGGCG GCATGCTGTT CTCCCTGGCG
GTCGGTACGC TCGCAACCAC CATCGGCTAC AACCCGCTGT TCGTGGCGCT GGCCGTGTTC
GACATCGTGG CCGCCATCCT CGTGTGGACG TTGCTCAACG ACAAGCAGGC CCGCCCCGTG
CCGATGCAGC CCGGCGGGAC GGCGCCCAGT ACTGCGGCCT GA
 
Protein sequence
MKPIKGLRWW IIGLVLSGLI MNYLARNALA VAAPEVNKVL NISTQQYGYI VAAFQAAYMV 
MQPVAGYVLD VLGTKLGFAL FAAAWSVVCL LHSTAGSWLS LAAFRAMLGM TEAAGFPSAL
RATAEWFPAK ERSIATGWFN IGSSVGAVVA PPLVVWCILH GNWRFAFAVI GGIGLVWSVL
WFLLYRVPAK HHRLSEEERN YIRAGQETPD DDANVPKPSW GKIVSGRRFW GIAIPRFLSE
PAWQTFNYWI PLYMATERHM NLKEIALFAW LPFLAADVGC VLGGYLAPWF QRRFSVSLVT
SRKLVMVTGC LCMIGPACIG LATSPYTAIA LFCVGGFAHQ TLSGALYTLT SDMFGKHEVG
TAVGLAGMSG YMGGMLFSLA VGTLATTIGY NPLFVALAVF DIVAAILVWT LLNDKQARPV
PMQPGGTAPS TAA