| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4442 |
|---|
| Symbol | |
|---|
| ID | 6285767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 752636 |
|---|
| End bp | 754672 |
|---|
| Gene Length | 2037 bp |
|---|
| Protein Length | 678 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618921 |
|---|
| Product | flagellar hook-associated 2 domain protein |
|---|
| Protein accession | YP_001892962 |
|---|
| Protein GI | 187926617 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1345] Flagellar capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCT CGTCCACGAG CAACAACTAC GTTCCGCCGA TCTCCATTCC GGGCATCGGG
ACGAACATCG ACGTCAACAC CCTTGTCACG AAGCTGATCC AGGCGGAAAG CAAGGGCATG
ACGCTGCGGC AGACGCAGCA AAAGGCCTTT CAGGCGCAAC TGTCGGCAGT CGGCTCGCTC
AAAAGCGCGC TGTCGACCGT CCAGACCGCG ATGGCGGCCC TGAACAACCC GGACACATTC
ACCGGCAACA AGGCCAGCGG GCACGACACG TCGATCCTCA CGGCTTCGCT GTCCAATACG
GCGCCGGCTG GCTCGTACCA AATCAACGTG ACGCAGCTTG CGCAGGCGCA GGTGGTATCG
GCCGCCGGGC AGGCGTCCAG CAAGACGCCC ATTGGCGGCG GCACGCCCAC CACCCTCACC
TTTTCTTTTG GGAATGTCTC GGGCGGCAGC TTTGCCAATG GCAAATACAC GGGCGCCACG
TTCACGCAGA ACGGCAACCA GGCCGGCGGC TCGATCACGA TCGACCCATC GAACAACACG
CTCGCCGGTA TCCGCGACGC CATCAATAGC GCCAACCTTG GCGTCTCGGC CAGCATCGTC
AACGACGGCA GCAGTTCGCC TTATCGGCTG GTGCTGACGT CCACTGCGGG CGGCGCCAAT
TCGGAGATGA AGATTTCCGT GTCGGGCGAC CCGGCCCTGC AATCCCTGCT GAGCCACGAC
CCGGCCGGCA CGCAGAACAT GACCGAGGTC GCCACAGGCC GCAACGCGCT TGCCACTGTC
AACGGCATCA GCGTGCAAAG CGCCACCAAC ACACTGACGG ACGTGGTGGA TGGCACGTCG
TTCACGCTCG CCAAGACCGG CAGCACGACC GTGACGGTGG GCAGCGACGC GGGCCAGGCC
AGCCAGTCGG TGCTGAACTT CGTCAAGGCG TACAACGCGC TGCGCATCCA GCTCAACGCG
CTGACCAAAT TCGATACCGC GAACGCCGCC AACAACGGCG CGCTGGCCGG CGACGTCAGC
ACGAAGGCGA TGATCAACCA GCTGACAGAC GTGCTGGGCC AGGGCATCGG CAACGGCGCG
TTCCAGTCGC TCGGCAGCAT CGGCGTGACG ATGGACAAGG AAGGGACGCT GTCGATTGAC
GACCCCAAGC TGTCCGCGGC CCTGAAGAAA TCGCCCAGCC AGGTGGCGGC CGTATTTGCC
GGCACCGGCA TGGCAACGGA TTCGCTGCTG AAGGTCGCGT CGTTTTCAAC GACCACGCAA
GCCGGCAGTT ATGCCGTCAA CGTCACTCAA CTGGCGACGC AGGGCTCGCT CAAGGGCTCG
GCGGCCGCCA ACACGACCAT CCAGAGCGGC GTGAACGACA GCCTGTCGGT CACGCTCAGC
GGCATCACGA CCAACATCAA GGTGCCGGCC GGCAGCTATA CCGCGTCGAG CCTGGCCGCG
CAGATTCAAA GCCAGGTCAA CGCGTCGCCA GACTTGCAGA GAGCCAAGGT GGAAGTCGCC
ATCGGCACCG ATGCCAATGG CGTGCTGACG CTGACCGACA AGCAATACGG CTCGGCATCG
ACGGTGTCGG TGTCAGGAAA CGGCGCCGCG TCGCTGCTCG GCGGCAGCCC GACGGCCACG
GCCGGTCGCG ATGTACAAGG CACCATCAGC GGGGCGGCCG CCACGGGTTC GGGCCAGAAC
CTCTACGGCG CCAGGGGCTC GGCCGTTGAT GGCCTGACGG TGCAAGTGTC TGGCGGTGCA
TTGGGCGACC GCGGCACCGT CACCGTGCAG CGTGGCTACG CGGCGCAACT GCACACCGTG
TCAGGCAACT TGCTGTCGAA CAACGGCATG GTGCAGAACG CCAGCGACGC CATCAACAAC
TCCATCACCT CGCTCGGCAA GGAAATCGAT CTGATGCAGA AACAGCTCGA TGCCAAGCAG
GCGCTGTATT ACACACAGTT CAATGCGCTA TCGAAGATGG TAGCCAGCAT GACGAATACG
AGCAATTACC TGACGACGCA GTTGGCGATA TTGCAGAAGC AGCGGACGGG GGGCTAA
|
|---|
| Protein sequence | MATSSTSNNY VPPISIPGIG TNIDVNTLVT KLIQAESKGM TLRQTQQKAF QAQLSAVGSL
KSALSTVQTA MAALNNPDTF TGNKASGHDT SILTASLSNT APAGSYQINV TQLAQAQVVS
AAGQASSKTP IGGGTPTTLT FSFGNVSGGS FANGKYTGAT FTQNGNQAGG SITIDPSNNT
LAGIRDAINS ANLGVSASIV NDGSSSPYRL VLTSTAGGAN SEMKISVSGD PALQSLLSHD
PAGTQNMTEV ATGRNALATV NGISVQSATN TLTDVVDGTS FTLAKTGSTT VTVGSDAGQA
SQSVLNFVKA YNALRIQLNA LTKFDTANAA NNGALAGDVS TKAMINQLTD VLGQGIGNGA
FQSLGSIGVT MDKEGTLSID DPKLSAALKK SPSQVAAVFA GTGMATDSLL KVASFSTTTQ
AGSYAVNVTQ LATQGSLKGS AAANTTIQSG VNDSLSVTLS GITTNIKVPA GSYTASSLAA
QIQSQVNASP DLQRAKVEVA IGTDANGVLT LTDKQYGSAS TVSVSGNGAA SLLGGSPTAT
AGRDVQGTIS GAAATGSGQN LYGARGSAVD GLTVQVSGGA LGDRGTVTVQ RGYAAQLHTV
SGNLLSNNGM VQNASDAINN SITSLGKEID LMQKQLDAKQ ALYYTQFNAL SKMVASMTNT
SNYLTTQLAI LQKQRTGG
|
|---|
| |