| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4441 |
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| Symbol | |
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| ID | 6285430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 746589 |
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| End bp | 752438 |
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| Gene Length | 5850 bp |
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| Protein Length | 1949 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642618920 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001892961 |
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| Protein GI | 187926616 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.407349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCG GTGTCATTCG CCTGCGCGGA GCCCGTCAGC ACAATCTCAA AAACCTCGAT
CTGGACCTCC GTACGGGCGA AATGACCGTC GTGACCGGCC CGTCGGGCTC CGGCAAGTCC
AGCCTCGTTT TCGACACGCT CTACGCCGAA GGCCAGCGCC GCTACGTCGA GACCTTCAGC
GCCTATGCGC GTCAGTTCCT CGACCGCATG GACCGGCCGC AGGTCGAGCA CGTCGAAGGC
GTGCCGCCCG CCATCGCCAT CGACCAGACC AACCCCGTGC GCAGCTCGCG CTCGACGGTC
GGCACGATGA CGGAACTGAA CGATCACCTG AAGCTGCTGT TTGCGCGCGC CGCCCAGCTG
TTCGACCGCG ACACCGCGCT GCCGGTGCGC CACGACACGC CGGAAACGAT CTACGACGAG
CTGCTCTCGC GCACGCGCGA TGGCGATCCA CGCCTGGTGG TGACCTTTCC CGTCGAACTG
CCCGCCAATA CGAGCCCTGA AGAAGTCACG CAATGGCTGT CGGTCAGCGG CTATACGCGC
GTGCAGGCCG AGCGCGTGGT GGAGTCCTCC ACGGGCAAGC GCAAGCTGCT CGATGTGGTG
GCCGACCGCT TCCGTCTGCA GGGCACCGAG CGTGCCCGCG CGCTGGAGGC CATTGAGTCG
TCGCTCAAGC GCGGCGGCGG GCGCGTCAGC GTGTATGTCT TGCCGGCCGA TGAAGGTGCG
GAGCCGACCA TCTGGCGCTT TTCCACCGGC CTGCACTGCC CCGAAAGCGA CCTGCGCTAC
GCAGACCCGC AACCCGCTCT CTTCTCGTTC AATTCCGCTT ATGGCGCGTG CGATACCTGC
CGTGGTTTCG GCCGCGTGAT CGGCGTCGAT CTTGGACTGG TGATTCCGGA CGAGCGCAAG
ACGCTGCGCG ACGGTGCCAT CAAGCCGATG CAGACGCCGG CCTGGAAGGA ATGCCAGGAC
GATCTGATGC GCTATGCCGC CGCAGCCGAC ATCCCGCGCG GCACGCCGTG GACAGAGATG
ACCGAAGCCC AGCGCAACTG GGTCATCAAT GGAGACCCGG CCTTCAAACG CGGCGGCTGG
AACAAGCAGT GGTACGGCGT GCGCCGCTTC TTCGACTACC TGGAGTCGAA GGCCTACAAG
ATGCACATCC GCGTGCTGCT CTCCAAGTAC CGCAGCTACA CGACCTGCGA AACCTGCGGC
GGTGCACGAC TGAAAACCGA GTCGATGCAG TGGCGCCTGG GCACCAAGGA AAACGCCGAC
GCCGTGCTCG CACCCGAACA CCGCTTCATG CCGCGCGGCG TGGCCTGGAG CCGCACCCAG
CTCGAAGCCT TGCCCGGGCT GACCGTGCAC GACCTGATGC TGCTGCCGAT CGAGCGCATC
CGCCGTTTCT TCGATGAACT GACGCTGCCG TCCACACTGC TCGACGACGC GCTCAAGCTG
CTGCTGGACG AGGTGCGCAC ACGGCTGGCG TATCTGTGCG ACGTGGGCAT CGGCTACCTG
ACGCTCGATC GCCAGAGCCG CACGCTGTCG GGCGGGGAAG TGCAGCGGAT CAACCTGACG
ACGGCGCTGG GCACATCGCT CGTCAACACG CTGTTCGTGC TGGATGAACC CAGCATCGGC
CTGCACCCGC GCGATCTGGA TCGCATTGTC GAAGCCATGC AGCGCCTGCG CGACGCGGGC
AACACGCTGG TGGTGGTCGA GCACGATCCG TCCGTAATGC TGGCTGCGGA CCGCCTGATC
GACATGGGGC CCGGCCCCGG CGAGCGTGGG GGCAACATCG TCTTTGACGG CACGCCTGCG
GCCATCCGTC AGGCCGATAC GCTCACGGGC GCGTATCTGT CGGGGCAGCG CCGCGTGGCC
GACGCCACGG ATTGGCAGGC GCGCCCCGTC ACCGACGCCA CGCCGCGGCT GGTGCTCGAA
GGCGCGTCGG AACACAACCT GCGCGATGTC ACGGTGGAAG TTCCGCTGCA GCGCCTGGTG
TGCGTGACCG GCGTGTCCGG CTCGGGCAAA TCGACGTTGA TCCAGGACGT GCTGCACCCG
GCGCTGGCGC GGCATTTCGG CAAGGCAACG GAATCGCCCG GCGCATTCCG CGCCTTGCGC
GGTGCCGATC AGATCAGCGA CGTGGTGTTC GTTGACCAAT CCCCGATCGG CAAGACCGCG
CGTTCGAACC CGGCCAGCTA CGTTGGCGCG TTTGATGAAA TCCGCAAGCT GTTTGCCAAG
GCGCCGATGG CGCTGCAGCG CGGCTACACG GCCGGCACGT TCAGCTTCAA CTCGGGCGAC
GGCCGTTGCC CGACCTGCGG CGGCTCGGGC TTCGAGCACG TCGAGATGCA GTTCCTCTCC
GACATCTACC TGCGCTGCCC GGATTGCGAC GGCACGCGCT ATCGCGCCGA AATCCTGGAA
GTGAAGCTGC CGCGTGCCGG CCGCGCATTG TCCGTGGCCG ATGTGCTGGA ACTGACGGTG
AGCGAAGCCG CCAGCGTGTT CGCCGAAGAC GCCGACGTGC TGCGCGTGCT GCAACCGATC
GTCGACGTGG GCCTGGAATA CGTGAAGCTT GGCCAACCGG TGCCGACGCT CTCCGGCGGC
GAGGCCCAAC GCCTGAAGCT GGCGGGCTTC CTGGCCGAAG CCGCGCAGGC CGCCCAGGCC
GCGGCGCGCA AGCGCGTCAA GCAGGACGTG CCCGCCAACG CCGGCCGCCT GTTCATGTTC
GACGAGCCCA CCACGGGCCT GCACTTTGAC GACATCGCCA AGCTGATGCG GGCGTTCGGC
AAGCTGCTCG ACGCCGGGCA TTCGCTGATC GTGATCGAAC ACAACCTCGA CGTGGTGCGT
GCGGCGGATT GGATCATCGA CCTCGGCCCC GAGGGCGGCG ACGCCGGCGG CCTGCTGGTC
TGCGCCGGCA CGCCTGCGCA GGTCAAAGAC TGCGCTGCAT CGCACACGGG CGCCGCGCTC
AAGCAATACG AAGCCAGCGT TGGTCAGCCG GAAGCCATCG AAGGCGTGCC GCTGCAGACG
GCACTGGCCG AGCGCCGCGC CAAGCGCGCT GCGCTGGCGG AAGTCCAGGG CGAAAACGTC
GTGCGCATCG TCCACGCCCA CGAGCACAAC CTCAAGGGCC TGAACGTCGA CATTCCGCAC
GGCAAGTTCA ACGTGGTGAC GGGCGTATCG GGTTCGGGCA AGTCGACGCT GGCGTTCGAC
ATCCTCTTCC ACGAGGGGCA GCGACGCTAT CTTGAATCGC TCAACGCGTA TGCACGTTCC
ATCGTGCAGC CCGCGGGGCG GCCGGAAGTC GATGCCGTCT ATGGCATTCC GCCCACCGTG
GCGATTGAGC AGCGCCTGTC GCGCGGCGGC CGCAAGAGCA CGGTGGCGAC CACGTCCGAG
GTGTGGCACT TCCTGCGACT GCTGTATGTG AAGCTCGGCG TGCAGCACTG CATCCACGAC
GGCACGCCGG TGTCGGCGCA AAGCCCGGAG GCGATCTTTG CGCAGCTCAT ACGCGATCAT
CGCGGCCAGC ACATCGGCCT GCTTGCGCCG CTGGTCCTGA ACCGCAAGGG CGTCTATACC
GACCTTGCCA AATGGGCCAA GGCCCGCGGC TATACGCATC TGCGCGTCGA TGGCGAATTC
CTGAGCGTCG ACCCGTGGCC GCGCCTGGAC CGCTTCCGCG AGCACACGCT GGAACTGCCC
GTCGGCGACA TCGTTGTCTC GCCGGAAAAC GAGGCCGCGC TGCGTGCGTT GCTGGAGCAG
GCGCTGGAGT ACGGCAAGGG CATCATGCAC GTGCTCGCGC CGCTGGATGG CCTGCAGAGC
GCCATGCACA AGGGCGGCAC GGCGCACGTG GGCAGCGTCA AGGTCTTTTC GACCAAGCGC
GCGTGCTCGA CCTGCGGCAC CAGCTACCCC GAGCTGGATC CGCGCATGTT CTCGTACAAC
AGCAAGCACG GCTGGTGCGC GAGCTGCGTC GGTACCGGGC TGGCGCTCAC GCGCGAACAG
CGCGCCGCGT TTGACGACAC CGTGCTCGGC GGAGACGATC GCGGCCGCGA GCAGACGCTT
CCTTCAGAGG AAGTCGATCC CGAAGGCATG ACCGACCTGC CCTGCCCGGA TTGCAACGGC
ACGCGCCTGA ACCCGACGGC GCGCGCCGTC ACCTTTGCCG ACAGGCCCAT CGTCGACATT
GCGCAGTGGA CGGTCAGCCA GACCCGCCGC TGGGTCGAGG GCCTGGACCT GACCGGCCGG
GACGCCGACA TCGCCCGCGA TGTGGTGGCC GAGATTCACA GCCGCCTGTC GTTCCTGGAG
GAAGTCGGCC TGGGCTACCT GAGCCTGGAT CGCGCCGCGC CAAGCCTGTC GGGCGGTGAA
GCCCAGCGTA TCCGCCTGGC TGCGCAACTC GGCAGCAACC TGCAAGGCGT GTGCTACGTG
CTGGATGAGC CGACCATCGG CCTGCATCCG CGCGACAACC AGATCCTGCT CGACGCGCTG
CGCAAGCTGG GCGACAAGGG CAACACGCTG GTGGTGGTCG AGCATGATGA AGACACCATC
CGCCGGGCCG ACCACATCAT CGACATCGGC CCGGGTGCCG GCAAGCGCGG CGGCACGCTG
GTTGCGCAAG GCGGCGTGCA GGATCTGGCC GCGCAGCCGG ATTCGCTCAC GGGCCGGTTC
CTGTCGCAGC CGATCGAGCA TCCGCTGCAG CCCCGCCGCC AGGTGGTTGC GCCGCGCGGC
GGCACGCAGG CGGTGCCGGA GCAATGGCTG ACGGTGCACG GCGCCAAGCT GCACAACCTG
CGCAACGTCA CCGCGACGAT GCCGCTGTCG CGTCTGGTGG CGATTACGGG CGTTTCGGGC
TCGGGCAAAT CGACGCTGGC GCGTGATGTG TTGATGACGA ACCTGCTCGA TGCGGTCGGC
CGTTCGGTGC TGTCTTCGCC GGCTACGCGG CGCGCACGCA AAGCCGCGCA GGCAGAGGCG
CCAGAGGCGA AGATGCCGCG CAAGCTCGAC GTCAAACACG ACTGGCACGG CTGCGACAGC
GTCATCGGCT GGGAAACCAT CGACCGCGTG CTGGAAGTCG ACCAGACGCC GATCGGCAAG
ACGCCGCGCT CCTGCCCCGC CACGTACATC GGCGTGTGGG ACACCATCCG CAAGCTCTTT
GCCGACACAC TCGAGGCGCG GGCACGCGGC TACACCGCCT CGCGCTTCTC GTTCAACACC
GGCGACGGCC GCTGCCCTGC CTGTGAAGGC CAGGGCGTGC GCACCATCGC CATGAGCTTC
CTGCCCGACG TGAAGGTCGG CTGCGACGTC TGCCACGGCC AGCGCTTCAA TGCAGAAACG
CTGGCCGTCA CCTGGCGCGG CAAGAACATC GGCGATGTGC TGACCATGGA GATCGACGAA
GCGGTCGAAT TCTTTGGTGC GATGAACAGC ATCGCCCACC CGCTGCAGTT GATGAAGGAC
GTGGGCCTCG GCTACCTGAC GCTGGGCCAG CCCTCGCCCA CGCTGTCCGG CGGCGAGGCG
CAGCGCATCA AGCTTGTCAC CGAGTTGTCC AAGGTGCGCG ACGACGTGAC GCGCCGCGGC
CAGAAGCCGC CCCACACGCT CTACGTGCTG GACGAGCCGA CGGTGGGCCT GCACATGGCC
GACGTGGCCA AGCTCATTCG CGTGCTGCAT CGCCTGGCGG ACGGTGGCCA CAGCGTGATC
GTGATCGAGC ACGACCTTGA TGTGATTGCC GAGGCGGACT GGATTCTCGA TCTCGGCCCC
GAAGGCGGCG ATGAAGGCGG CACGATCGTC GCGGCTTGCG GGCCGGAGGC GTTGACGCGC
GTGGCGGCCA GCCATACTGG CGCAGCGTTG GTGCCGGTGC TGGCGCGCGG CAAGCAGGTC
GATCCGAGCA AGGAAGGCGA GACGGTCTAG
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| Protein sequence | MSSGVIRLRG ARQHNLKNLD LDLRTGEMTV VTGPSGSGKS SLVFDTLYAE GQRRYVETFS
AYARQFLDRM DRPQVEHVEG VPPAIAIDQT NPVRSSRSTV GTMTELNDHL KLLFARAAQL
FDRDTALPVR HDTPETIYDE LLSRTRDGDP RLVVTFPVEL PANTSPEEVT QWLSVSGYTR
VQAERVVESS TGKRKLLDVV ADRFRLQGTE RARALEAIES SLKRGGGRVS VYVLPADEGA
EPTIWRFSTG LHCPESDLRY ADPQPALFSF NSAYGACDTC RGFGRVIGVD LGLVIPDERK
TLRDGAIKPM QTPAWKECQD DLMRYAAAAD IPRGTPWTEM TEAQRNWVIN GDPAFKRGGW
NKQWYGVRRF FDYLESKAYK MHIRVLLSKY RSYTTCETCG GARLKTESMQ WRLGTKENAD
AVLAPEHRFM PRGVAWSRTQ LEALPGLTVH DLMLLPIERI RRFFDELTLP STLLDDALKL
LLDEVRTRLA YLCDVGIGYL TLDRQSRTLS GGEVQRINLT TALGTSLVNT LFVLDEPSIG
LHPRDLDRIV EAMQRLRDAG NTLVVVEHDP SVMLAADRLI DMGPGPGERG GNIVFDGTPA
AIRQADTLTG AYLSGQRRVA DATDWQARPV TDATPRLVLE GASEHNLRDV TVEVPLQRLV
CVTGVSGSGK STLIQDVLHP ALARHFGKAT ESPGAFRALR GADQISDVVF VDQSPIGKTA
RSNPASYVGA FDEIRKLFAK APMALQRGYT AGTFSFNSGD GRCPTCGGSG FEHVEMQFLS
DIYLRCPDCD GTRYRAEILE VKLPRAGRAL SVADVLELTV SEAASVFAED ADVLRVLQPI
VDVGLEYVKL GQPVPTLSGG EAQRLKLAGF LAEAAQAAQA AARKRVKQDV PANAGRLFMF
DEPTTGLHFD DIAKLMRAFG KLLDAGHSLI VIEHNLDVVR AADWIIDLGP EGGDAGGLLV
CAGTPAQVKD CAASHTGAAL KQYEASVGQP EAIEGVPLQT ALAERRAKRA ALAEVQGENV
VRIVHAHEHN LKGLNVDIPH GKFNVVTGVS GSGKSTLAFD ILFHEGQRRY LESLNAYARS
IVQPAGRPEV DAVYGIPPTV AIEQRLSRGG RKSTVATTSE VWHFLRLLYV KLGVQHCIHD
GTPVSAQSPE AIFAQLIRDH RGQHIGLLAP LVLNRKGVYT DLAKWAKARG YTHLRVDGEF
LSVDPWPRLD RFREHTLELP VGDIVVSPEN EAALRALLEQ ALEYGKGIMH VLAPLDGLQS
AMHKGGTAHV GSVKVFSTKR ACSTCGTSYP ELDPRMFSYN SKHGWCASCV GTGLALTREQ
RAAFDDTVLG GDDRGREQTL PSEEVDPEGM TDLPCPDCNG TRLNPTARAV TFADRPIVDI
AQWTVSQTRR WVEGLDLTGR DADIARDVVA EIHSRLSFLE EVGLGYLSLD RAAPSLSGGE
AQRIRLAAQL GSNLQGVCYV LDEPTIGLHP RDNQILLDAL RKLGDKGNTL VVVEHDEDTI
RRADHIIDIG PGAGKRGGTL VAQGGVQDLA AQPDSLTGRF LSQPIEHPLQ PRRQVVAPRG
GTQAVPEQWL TVHGAKLHNL RNVTATMPLS RLVAITGVSG SGKSTLARDV LMTNLLDAVG
RSVLSSPATR RARKAAQAEA PEAKMPRKLD VKHDWHGCDS VIGWETIDRV LEVDQTPIGK
TPRSCPATYI GVWDTIRKLF ADTLEARARG YTASRFSFNT GDGRCPACEG QGVRTIAMSF
LPDVKVGCDV CHGQRFNAET LAVTWRGKNI GDVLTMEIDE AVEFFGAMNS IAHPLQLMKD
VGLGYLTLGQ PSPTLSGGEA QRIKLVTELS KVRDDVTRRG QKPPHTLYVL DEPTVGLHMA
DVAKLIRVLH RLADGGHSVI VIEHDLDVIA EADWILDLGP EGGDEGGTIV AACGPEALTR
VAASHTGAAL VPVLARGKQV DPSKEGETV
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