Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4426 |
Symbol | |
ID | 6286045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 734210 |
End bp | 734857 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642618906 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_001892947 |
Protein GI | 187926602 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGCG TGATGATCGC CGACGATCAT GCCGTGATGC GCGATGGCGT GCGTCATATC CTTGAGCGCG CGGGGGATTT TGAAGTCGCC TGCGAAGCCT CCGACGGTAC ACAGGTCGTG CAACTTGTGC GTGATCATCA ACCGCAGGTG ATCGTGCTCG ATCTTTCCAT GCCGGGGCAC AGCGGGCTGG AACTGCTCCG CCAGTTGCAT GACGATCACC CCAGGGTGCG CGTGCTGGTG CTGACCATGC ACGCTGAAGA ACAATACGTG GCACGCGCCT TTCGTGCGGG GGCGGCCGGC TACCTGACAA AGGAGAGCGC CGCCACCGAA CTGGTTACCG CGCTGCAGAA GGTGGCGAAC GGCGGCACCT ACGTCAGCCC ACCCATGGCG GAGAAGCTCG CGCACAGCCT GGGCGAGCCC AGTGAAGAGG CGGCCCACAC GCGCCTGTCC GACCGCGAGA TGGAAGTCTA TCGCCGGCTG GTGCGCGGCG AGCCCTTGAC CGAGATCGCC ACCAGCCTGT GCGTGAGCGC CAAGACCATC AGCACCTACA AGATGCGGCT GATGGACAAG CTGCAGCTCT CCAGCGAAGC CGCCCTTGTG CGTTACGCGA TACGCCATCG CTTGTTTTCC GACGACGATA CGCTGTAG
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Protein sequence | MIRVMIADDH AVMRDGVRHI LERAGDFEVA CEASDGTQVV QLVRDHQPQV IVLDLSMPGH SGLELLRQLH DDHPRVRVLV LTMHAEEQYV ARAFRAGAAG YLTKESAATE LVTALQKVAN GGTYVSPPMA EKLAHSLGEP SEEAAHTRLS DREMEVYRRL VRGEPLTEIA TSLCVSAKTI STYKMRLMDK LQLSSEAALV RYAIRHRLFS DDDTL
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