Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4424 |
Symbol | |
ID | 6286043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 732228 |
End bp | 732926 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642618904 |
Product | ABC transporter related |
Protein accession | YP_001892945 |
Protein GI | 187926600 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.056527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCAACG TTGCCATTGC CGCTCAGGCC CTCGATAAAT GGTTTGGCGA GGGCGAGGCG CGTACCCGCG CGCTCATGCA GGTCAGTTTC GAGGCCGAGT TCAACGAGAT GCTGTTCATC GTCGGACCGT CGGGCAGCGG CAAGACCACG CTGCTGAGCG TGATATCGGG CATCCTGCGC CCGGATAGCG GCCGCGCGAT GGTGGACGGG GTTGACATCT GGAGCCTGGG CGCCGACGCG CTGGCCGATT TCCGCCTGGG CAGGATCGGC TTCGTGTTTC AGGATTACCA CCTGTTCCCG CGCCTCACCA CGGTCGAGAA CGTCGCCATC CCGCTGATCC TGCGGCATGT GGCCTGGGAC ACCGCGCTCG ATCAGGCCAT GCACTACCTC GATGTCGTCG GGCTGAAGAA CCGCGCCCAG TTGCCGCCGG TCAAGCTCAG TGGCGGCGAG CAGCAGCGTG TGGCCATTGC ACGCGCCATC GTCACGCAGC CCGACATCCT GATCCTGGAT GAACCCACCG CATCGCTGGA TGGCGACACC GGCCGTTCGA TCATGCAGTT CGTGAAGACG GAGATCCTGA ACGCGCACCG CTGTATCGTG ATCGTGACGC ACGACGCGCG CATCCTCGAC CTGGCCAGCC GCATCCTCGA CATGGAGGAC GGCAAGCTGA GCCGCATTGA ACACGGAGCG ATGCGATGA
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Protein sequence | MANVAIAAQA LDKWFGEGEA RTRALMQVSF EAEFNEMLFI VGPSGSGKTT LLSVISGILR PDSGRAMVDG VDIWSLGADA LADFRLGRIG FVFQDYHLFP RLTTVENVAI PLILRHVAWD TALDQAMHYL DVVGLKNRAQ LPPVKLSGGE QQRVAIARAI VTQPDILILD EPTASLDGDT GRSIMQFVKT EILNAHRCIV IVTHDARILD LASRILDMED GKLSRIEHGA MR
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