Gene Rpic_4390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4390 
Symbol 
ID6286003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp694295 
End bp696694 
Gene Length2400 bp 
Protein Length799 aa 
Translation table11 
GC content61% 
IMG OID642618871 
Productphosphoenolpyruvate synthase 
Protein accessionYP_001892912 
Protein GI187926567 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 
TIGRFAM ID[TIGR01418] phosphoenolpyruvate synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAACG ACACCGCGCA CGTTGTCTGG CTCGAAAACC TCCGGCGGAC CGATGTTCCA 
CGGGTCGGCG GCAAGAATGC GTCGCTCGGC GAGATGCTGG CCAACCTGGC GGGACGGGGC
GTCAACGTTC CGCCGGGCTT TGCACTGACA GCCGATGCTT TCAGGCAATT CATAGAGGCA
AATGATTTGC AGCCGGTCAT CTTCTCGGCG CTCACCGACC TCGATGACAG CAAACTTTCC
CTGGCCGAAG CGGGACTTGC CATCCGACGC GCCATGCTTC GCGGTGAATG GCCAAAAGAG
ACGGCGCGGG CAATCCGTCT TGCTTACGAT GAACTGAACC GCCGAACAGG GCAATCCGAC
TTGGACGTTG CCGTGCGATC CAGCGCAACG GCCGAGGATC TGCCAGAAGC AAGCTTCGCT
GGGCAGCAAG AGACCTATCT CAACATCAAG GGCGAGCGCG CCCTGCTTGA CGCCTGCCGG
CGCTGCTACG CGTCGCTTTT CACCGACCGG GCGATCAGCT ACCGCCAAGC GAAGGGAATC
GACCATCTGA AGGTCGCGCT GTCGGTCGGT GTCCAGCGCA TGGTGCGATC GGACCTTGGG
GGCGCCGGCG TCATGTTTTC CATCGATACC GAGACGGGCT TTGACAAGTC CGTCCTGATC
AATGCGGCAT GGGGGCTCGG CGAAAACGTG GTTCAGGGAG AAGTCGATCC CGATGAATAT
GAGGTCTTCA AGCCGCTGTT GTTGGAACCG TCGCTATCGC CCATTGTCGG GAAAAAGCTT
GGCGGAAAAA GCCTCAAAAT GATCTGCACA ACCGACAACG AGCAGCCGAC GAAGAACGTC
CCCACCTCGA AAGCCGAGCG TGCGGCTTTC GTCCTGAGCG ACCACGATAT CCTGGCTTTG
TCTCGCTGGG CCTGCGTGAT CGAACAGCAC TATGGCCAAC CGATGGACAT TGAATGGGCA
AAGGACGGGC TCACCGGCGA GGTGTTCGTC GTGCAAGCCC GCCCGGAAAC GGTCGAGTCA
CGTCGTGAAG CCAGTGCGGT AAGGACGTGG CATATCAAGA AGGCAGGCCG CAAGATCCTC
TCCGGTGTCA GCATCGGCGA AGCCATCGCC GCCGGCAAAG TCTGCATCAT CGAAAGCCCC
AGCGACATGG GGCGTTTCGT CGACGGCGCC ATCCTGGTCA CCCAGACGAC GGATCCGGAT
TGGGTGCCCG TCATGCGGCG GCCGGCTGCC ATCATCACCG ACCAGGGGGG ACGCACATCG
CACGCAGCGA TCGTCAGCCG AGAGCTGGGG CTTCCAGCCA TCGTCGGCGC CGGTAACGCG
ACGCATCTGC TGCATGACGA GCAGGAGATC ACCGTGTCAT GCGCAGAAGG CCGAGAAGGA
TTCGTCTACG AAGGCATTGC CGACTTTGCG GTCGAGGAGA TCGACTTTGG CAATATCCCT
GCGACGCGCA CCAAGGTCAT GCTGAACCTC GCCAACCCGG CGGCGGCGTT TCGCTGGTGG
CGGATACCCG CCGACGGTGT CGGGCTCGCG CGAATGGAGT TCGTCGTGAG CAACCATATC
AAGATCCACC CGATGGCTCT GGCCCGTTTC GAGACACTCA AGGACGAAGG TGCCAGGCAA
GCCATCGCAG CGTTGACGAC TGGCTACGAA GATCGCACGG AATATTTCGT CGATCGCCTT
GCGCGTGGAT TGGGACGGAT CGCAGCGGTC CAGTATCCGC ACCCTGTCAT TGTCCGCATG
AGCGACTTCA AGACCAATGA GTACGCGCAT CTGATTGGCG GCGCGGAATT CGAGCCTAAG
GAAGACAATC CCATGCTCGG ATTCCGTGGC GCATCGCGGT ACTACTCCCC ACGCTACCGG
GAAGGCTTCG CGCTCGAATG CCGCGCCATT CGACGCCTGC GCAATGAGAT GGGCTTCACG
AACGTCGTGG TGATGATCCC TTTCTGCCGT TCAACAAAAG AAGCGGACCG CGTGCTTGAG
GTCATGGCTG ACAACGGCAT CCATCGTGGC GAAGCCGGTC TCCAGGTTTA CGTGATGTGC
GAGATCCCAT CGAACGTGAT TCTGGCAAAG GCCTTCGCGC AACGTTTCGA TGGCTTCTCC
ATTGGCAGCA ACGATCTGAC GCAACTGACG CTGGGCGTTG ACCGTGACTC GGCCGATCTC
GCGGCGCTTT TCGACGAACA GGATGACGCC GTCAAGTGGA TGATCCAAAG CGTCATTGCG
AGTGCTCACG AGGCGGGTGC ACATGTCGGT CTGTGCGGTC AGGCGCCGAG CGACCACCCT
GAGTTTGCTG CCTTCCTGGT CGAATGCGGT ATCGATTCCA TATCGGTGAG TCCTGACAGC
TTCATCGCGG TCAAGCGCAG TGTGGCTGCC GCGGAGAGCA CTGCCGCGAA AGCGCCGTGA
 
Protein sequence
MVNDTAHVVW LENLRRTDVP RVGGKNASLG EMLANLAGRG VNVPPGFALT ADAFRQFIEA 
NDLQPVIFSA LTDLDDSKLS LAEAGLAIRR AMLRGEWPKE TARAIRLAYD ELNRRTGQSD
LDVAVRSSAT AEDLPEASFA GQQETYLNIK GERALLDACR RCYASLFTDR AISYRQAKGI
DHLKVALSVG VQRMVRSDLG GAGVMFSIDT ETGFDKSVLI NAAWGLGENV VQGEVDPDEY
EVFKPLLLEP SLSPIVGKKL GGKSLKMICT TDNEQPTKNV PTSKAERAAF VLSDHDILAL
SRWACVIEQH YGQPMDIEWA KDGLTGEVFV VQARPETVES RREASAVRTW HIKKAGRKIL
SGVSIGEAIA AGKVCIIESP SDMGRFVDGA ILVTQTTDPD WVPVMRRPAA IITDQGGRTS
HAAIVSRELG LPAIVGAGNA THLLHDEQEI TVSCAEGREG FVYEGIADFA VEEIDFGNIP
ATRTKVMLNL ANPAAAFRWW RIPADGVGLA RMEFVVSNHI KIHPMALARF ETLKDEGARQ
AIAALTTGYE DRTEYFVDRL ARGLGRIAAV QYPHPVIVRM SDFKTNEYAH LIGGAEFEPK
EDNPMLGFRG ASRYYSPRYR EGFALECRAI RRLRNEMGFT NVVVMIPFCR STKEADRVLE
VMADNGIHRG EAGLQVYVMC EIPSNVILAK AFAQRFDGFS IGSNDLTQLT LGVDRDSADL
AALFDEQDDA VKWMIQSVIA SAHEAGAHVG LCGQAPSDHP EFAAFLVECG IDSISVSPDS
FIAVKRSVAA AESTAAKAP