| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4381 |
|---|
| Symbol | |
|---|
| ID | 6285991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 685684 |
|---|
| End bp | 687048 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642618862 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_001892903 |
|---|
| Protein GI | 187926558 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.496128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTGC AATTTCTCGG CGCAACCGAC ACGGTGACGG GCTCAAAGTA TGTGCTTGAG
ACCGGCGCGC ACCGTGTGAT GGTCGACTGC GGGCTGTTTC AGGGCTACAA GTCGCTGCGT
CTGCGCAACT GGGACAAGCT TGCCGTCAAC CCGCATCACA TCGATGCGGT CGTGCTCACG
CATGCCCATA TCGACCACAG CGGCTACCTG CCGCTGCTCG TGCGCAATGG GTTTCATGGT
CCGGTCTATT GCACGAAAGG CACGGCAGAA CTGTGCAACA TCCTGCTGCC TGACAGCGCT
CGGCTTGCGC AGGAGGATGC ACAGTACGCG AACGCCGAGG GGTTCTCGCG CCATCATCCC
GCGTTGCCGC TCTATGACGA AAAGGACGCC GCCAGGGCGT TACGCCGGCT GCATCCCGTC
GGCTATGGCG AGCGCTTCTC CGTTGCCGAC GGCGTGGAAG CGGAGTTCCA CCGTGCAGGA
CACATCATCG GTGCGGCCAC GGCAACATTG CTGACCGAGG GGCGCCGCAT TGTCTTCTCC
GGCGACCTGG GGCGGCAGGT CGATCCCGTC ATGCGGCCAC CCGAGCCCAT TGCGGAGGCC
GATACCCTGT TGGTCGAATC GACCTATGGC GATCGCGTGC ATCCGGAGGG GGACCCGCTC
GATGCACTCG AGCAGGTTGT GCAGCGGACC ATCGGGCAGG GCGGCACGCT GCTGATCCCG
GCTTTCGCTG TGGGGCGTAC GCAGGAGCTT CTGTATTGCC TTTACATGCT GATCCGCGAG
CATCGGATTC CACATGTGCC GATCTACCTC GACAGCCCGA TGGCCGAACT GGCGACGGGG
GTGTTTGCGC ATCATATTGA CGATCTGCAT ATCGAGGCTG CCGACTGCCA GGCCGCCTGT
GCATTGGCCA TTCCGGTGCA GAGCCCTGAA CAGTCGAGGC ATCTGGGGAA CGATCGCGCG
CCCAAGATCA TTCTTGCGGC AAGCGGCATG GCGACCGGCG GGCGGGTGCT GCATCACCTC
AAGAGCTTTG GCGGCGGCAA GCGCAACGCC ATCCTGATGT CGGGCTTCCA GGCCGCCGGC
ACGCGGGGCG CCGCGCTGCT GGCCGGTCAA AGGGCGTTGC GCGTGCACGG ACGCGAGGTT
GCCATCCGAG CCTCGGTTGA GCAGATCCAG AATCTGTCCG CCCACGCGGA TGCCAATGAA
CTGATGACCT GGTTACGGGG CTTCACGCGG CCGCCACAGC AGACCTTCAT CGTGCATGGC
GAGCCAGCCG CCAGCGACGC CTTGCGCCAG CGGATCGAGC ATGAATTGCA GTGGCCGGTC
CGCATGCCGG AGTACCGCCA GTCCTACGAA CTGGAGGGTG CATGA
|
|---|
| Protein sequence | MRLQFLGATD TVTGSKYVLE TGAHRVMVDC GLFQGYKSLR LRNWDKLAVN PHHIDAVVLT
HAHIDHSGYL PLLVRNGFHG PVYCTKGTAE LCNILLPDSA RLAQEDAQYA NAEGFSRHHP
ALPLYDEKDA ARALRRLHPV GYGERFSVAD GVEAEFHRAG HIIGAATATL LTEGRRIVFS
GDLGRQVDPV MRPPEPIAEA DTLLVESTYG DRVHPEGDPL DALEQVVQRT IGQGGTLLIP
AFAVGRTQEL LYCLYMLIRE HRIPHVPIYL DSPMAELATG VFAHHIDDLH IEAADCQAAC
ALAIPVQSPE QSRHLGNDRA PKIILAASGM ATGGRVLHHL KSFGGGKRNA ILMSGFQAAG
TRGAALLAGQ RALRVHGREV AIRASVEQIQ NLSAHADANE LMTWLRGFTR PPQQTFIVHG
EPAASDALRQ RIEHELQWPV RMPEYRQSYE LEGA
|
|---|
| |