Gene Rpic_4372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4372 
Symbol 
ID6285975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp673625 
End bp675916 
Gene Length2292 bp 
Protein Length763 aa 
Translation table11 
GC content63% 
IMG OID642618853 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_001892894 
Protein GI187926549 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTCCA CGCGCTTGCT CGCCAACGTA GCATTGCTTG CCGTGTCGGC GCTGACTCTG 
GCGGCCGGGT TGTGGGCACG GTACCTCGGT GCCGATGTCC TGGCGTGGCA ACTCTGGCTG
ATTGGTGTCG TTCCAAACTG GCTAACCCTG GTCGTCACGA TTGTTCGGTC ACTGATGCGA
CGGCAGGCCG GCGTGGATGT TCTGGCAGTG ATATCGATCA GCTTTGCGCT CCTGTCCGGC
GAGGTGCTGG TCGCAGCGGT CATTGCGTTG ATGCTCGCGA CGGGGCGCAC ATTGGAAGAC
TTCGCGCAAG CGCGTGCGCA GCGCGAGATG ACCGCGTTGC TCGGCCATGC ACCCAAGCGG
GCCAATCGCT TCGCCGACGG GCAGTGGCAC CAAGTCAGTC TGGAGAAGGT GCAAGCGGGT
GACCGGTTGC TGGTGCGGCA CGGTGAAGTC GTGCCGGTGG ATGGCACCTT GTCCGGGCCT
GCCGATCTCG ATGAATCCAC GTTGACAGGA GAATCGCTCA CCCGCCATCG TTTGACGGCA
GATGCCATTT GCAGCGGCGT GCTGAATGTG GGCGCCGCTT TCGAGATGAT CGCGAGTGCA
TCCGCCGAAA AGAGCACGTT TGCAGGCGTT GTCCGGCTAG TCAGTGCGGC GCAGTCCGAG
CGCAGTCCTT CCGTAAGGCT GGCTGACCGG TACGCCTTTG CCTTTGGGGG CGTCGCCGTT
CTCCTCGCTG GGACAAGCTG GATTCTCACG GGTGATTCGG CGCGTTGTCT TGCCGTGCTT
GTCGTGGCTA CGCCGTGTCC GCTTATCCTG GCAGTGCCCG TCGCCATCGT TTCAGGGCTG
TCGCGTTGTG CCAAGCGAGG CGTGCTGGTC AAAGGCGGCG GCGCGCTCGA GCGGCTGGCG
TTGGCCGACA CGCTGTTCTT CGATAAAACT GGCACGCTCA CCAGCGGATT TGCACGACTG
GTCGATGTTG AATGCGCACC GCACTACGCG TCCGATGTTG TGCTGGGCCT GGCCGGATCA
ATCGCACAGG CATCGAATCA CGTCACGGCA GAAGCCGTCG CCAAGGCTGC GCGCGAACAG
GGTGCAAAGC TGCGACTGCC GAGTGGGGTT GTCGAGAGTC CGGGCGCTGG CGTTTGCGGC
CGCGTTGACG GGCATGTCGT CTCCATCGGC TCATTGCCTT ATGTCTTGGG CTCATCCGCC
GAGCCGTCCT GGGTGGAAGC GTTCGCCAAG CGCGTGAGCT ATGCCGGTGC GTCGGCTGTC
TTTGTCGGCG TCAATGGTGA ACTCGTGGGC GCATTGCAGT TGATTGACCG CGTTCGCCTT
GAGGCGCCTC GTGCGCTCCG ACTCCTGCGT CGAGAGGGCA TCAAACGGCA AGCGATGTTG
ACCGGGGATC GGGCAGATGT TGCCGAATCG GTTGGATCCA TGTTGGGGGT GACGGAGGTC
CATGCGGCCC TGTCGCCAGC GGCCAAGCTC GCGGTGATTC GGGGCGCCCG CGCCGACGGC
AAGGTGATCA TGGTCGGTGA TGGCGTCAAC GATGCACCTG CGCTCGCCGC GGCGGACATT
GGCGTGGCAA TGGGTGCGCG GGGCGCTGCG GCCTCTTCGG AAGCTGCAGA CATTGTCTTG
TTGGTGGACC GCTTGGATCG GCTCGTTGAC GCGGTCCGGA TAGCGCACCG TACACGCAGC
GTGGCACTGC AGAGCGTGAT GATTGGCATG TCTCTGTCGC TCGCAGCCAT GGTTGTCGCA
GCGCTGGGCC ATCTACCACC GTTGGCGGGC GCCATGCTGC AGGAGCTCAT CGATGTATTG
GCGATCGCCA GCGCGTTGAG AGCGCTGTTG CCCACGCCAG ATGAAGCGAC CCGTTCACTC
GTCTGCGCAG ACGTCGAGCG CCTCAAGGCT GAACACGCGG AGCTGGAGCC CATTCTGAGC
CGGATCCGCA TGGTCGCAGA CTCACTGCCC CATATGGGAG GCAGTGCCGC AAAAGGCGCG
CTGCTATCGC TCAACCAGTC CTTGGCTGAC GTCCTGGTGC CACATGAGCG CCGAGACGAT
ACCCAGCTCT ATCCGGACGT CGCCCGCCTG CTCGGAGGAG ACGACCCGAT GGCGGCAATG
AGCGCCATGC ATCGCGAGAT ATTCCGCGTG ACGAACCTGT TGGGCCGGAT CGTGGCGGAT
GTTTCCGCCG ACGGCCCCGA TGCCGCTGTG ACGCAAGAGC TGCAACGCTT GCTGTATGGG
CTCGATGCCA TTCTGCGGCT GCATTGCGCA CAAGAAGACG AACTGTTCCA TGTGCTCGGA
GGAGAGGCTT GA
 
Protein sequence
MHSTRLLANV ALLAVSALTL AAGLWARYLG ADVLAWQLWL IGVVPNWLTL VVTIVRSLMR 
RQAGVDVLAV ISISFALLSG EVLVAAVIAL MLATGRTLED FAQARAQREM TALLGHAPKR
ANRFADGQWH QVSLEKVQAG DRLLVRHGEV VPVDGTLSGP ADLDESTLTG ESLTRHRLTA
DAICSGVLNV GAAFEMIASA SAEKSTFAGV VRLVSAAQSE RSPSVRLADR YAFAFGGVAV
LLAGTSWILT GDSARCLAVL VVATPCPLIL AVPVAIVSGL SRCAKRGVLV KGGGALERLA
LADTLFFDKT GTLTSGFARL VDVECAPHYA SDVVLGLAGS IAQASNHVTA EAVAKAAREQ
GAKLRLPSGV VESPGAGVCG RVDGHVVSIG SLPYVLGSSA EPSWVEAFAK RVSYAGASAV
FVGVNGELVG ALQLIDRVRL EAPRALRLLR REGIKRQAML TGDRADVAES VGSMLGVTEV
HAALSPAAKL AVIRGARADG KVIMVGDGVN DAPALAAADI GVAMGARGAA ASSEAADIVL
LVDRLDRLVD AVRIAHRTRS VALQSVMIGM SLSLAAMVVA ALGHLPPLAG AMLQELIDVL
AIASALRALL PTPDEATRSL VCADVERLKA EHAELEPILS RIRMVADSLP HMGGSAAKGA
LLSLNQSLAD VLVPHERRDD TQLYPDVARL LGGDDPMAAM SAMHREIFRV TNLLGRIVAD
VSADGPDAAV TQELQRLLYG LDAILRLHCA QEDELFHVLG GEA