Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4359 |
Symbol | sdhB |
ID | 6285958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 662624 |
End bp | 663325 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642618840 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_001892881 |
Protein GI | 187926536 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTA TTTTTGAAGT CTATCGCTAC GATCCGGACA AGGACGCAGC GCCCCGCATG CAGACCTACG AGGTTGAACT TGACGGTCAC GAGCGCATGC TGCTCGACGC GCTGGTCAAG CTGAAGAAGC TCGACGAGTC GATCGCGTTC CGTCGTTCGT GCCGCGAAGG CGTGTGCGGC TCCGACGCCA TGAACATCAA CGGCAAGAAT GGTCTGGCGT GCCTGACCAA CATGCGTGAG CTGCCCGAGA AGATCGTGCT GCGCCCGCTG CCGGGGCTGC CGGTGGTGCG CGACCTGATC GTCGACATGA CGCAGTTCTT CAACCAGTAC CACTCGATCA AGCCGTACCT GATCAACGAC GAGCCGCCGC CCGAGAAGGA GCGTCTGCAG TCGCCGGAAG AGCGCGAAGA GCTTGACGGC CTGTACGAGT GCATTCTGTG CGCGAGCTGC TCGACGTCGT GCCCGTCGTT CTGGTGGAAC CCGGACAAGT TCGTCGGCCC GGCCGGTCTG CTGCAGGCAT ATCGTTTCAT CGCCGACAGC CGCGACCAGG CCACCAGCGA ACGTCTGGAC AATCTGGAAG ATCCGTACCG CCTGTTCCGC TGCCACACCA TCATGAATTG CGTCGATGTG TGCCCGAAGG GGCTGAACCC GACCAAGGCC ATCGGCAAGA TCAAGGAATT GATGGTGCGC CGCGCGGTGT AA
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Protein sequence | MKRIFEVYRY DPDKDAAPRM QTYEVELDGH ERMLLDALVK LKKLDESIAF RRSCREGVCG SDAMNINGKN GLACLTNMRE LPEKIVLRPL PGLPVVRDLI VDMTQFFNQY HSIKPYLIND EPPPEKERLQ SPEEREELDG LYECILCASC STSCPSFWWN PDKFVGPAGL LQAYRFIADS RDQATSERLD NLEDPYRLFR CHTIMNCVDV CPKGLNPTKA IGKIKELMVR RAV
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